Job Description P0A707 Confidence 9.91% Date Thu Jan 5 11:04:24 GMT 2012 Rank 85 Aligned Residues 40 % Identity 30% Template c2yt7A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family PDBTitle: solution structure of the pdz domain of amyloid beta a42 precursor protein-binding family a member 3 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		R	L	T	G	L	E	G	E	Q	L	G	I	V	S	L	R	E	A	L	E	K	A	E	E	.	A	G	V	D	L	V	E	I	S	P	N	A	E	P	P	V
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		R	L	T	A	I	N	G	T	S	L	V	G	L	P	L	A	A	C	Q	A	A	V	R	E	T	K	S	Q	T	S	V	T	L	S	I	V	H	C	P	P	V
Template Known Secondary structure							S	S		B		T	T	S												T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions