 |
Job Description | P75961 | Confidence | 2.76% | Date | Thu Jan 5 12:16:30 GMT 2012 |
Rank | 79 | Aligned Residues | 49 |
% Identity | 20% | Template | c2e37B_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:l-lactate dehydrogenase; |
PDBTitle: structure of tt0471 protein from thermus thermophilus
|
Resolution | 2.30 Å |
|
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  | . |  |  |  |  |
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | L | P | D | I | N | N | E | A | S | L | R | Q | N | G | K | A | M | . |
L | A | H | A | S | S | S | L | S | D | V | K | G | S | V | L | L | L | F | T | T | R | E | P | R | L | I | M | I | T | N | G | Q |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |   |   | . | . | . |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |
Template Sequence |   |
V | V | L | V | D | L | D | R | K | . |
. |
. |
L | A | Q | A | H | A | E | D | I | L | H | A | T | P | F | A | H | P | V | W | V | R | A | G | S | Y | G | D | L | E | G | A | R | A | V | V | L | A | A | G | V |
Template Known Secondary structure |   |
 |  |  |  |
| S | S |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T | G | G | G | S |
|
|
|  |  |  |  |
|
| G | G | G | G | T | T |
| S |  |  |  |  |
|
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | |
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|