Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8Q0
Confidence96.75%DateWed Jan 25 15:20:18 GMT 2012
Rank2Aligned Residues97
% Identity20%Templated1nekd_
SCOP infoHeme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
Predicted Secondary structure 








Query SS confidence 















































































Query Sequence  RFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEK
Query Conservation 
 




 
 
 

 
 
 

 

  
  
  
   

  
 

  
 





 
 



 


 
 



 
 
    
Alig confidence 























..



































.......







.

Template Conservation    
  





 
  
    
   ..       
         
   
   
 
     
  ....... 

  


.

Template Sequence  HDFILVRATAIVLTLYIIYMVGFF. . ATSGELTYEVWIGFFASAFTKVFTLLALFSILIHAW. . . . . . . IGMWQVLT. DY
Template Known Secondary structure  ..TTTSS

SS........
Template Predicted Secondary structure  ..





........
Template SS confidence 















































































   14.....20.........30....... ..40.........50.........60.........70... ......80. ..
 
   104.....110.........120.........130
Predicted Secondary structure 

Query SS confidence 


























Query Sequence  MGPEPIIKSLWAVTVVATIVILFVALY
Query Conservation 
    

 
      
 


 
 
 
 
Alig confidence 


























Template Conservation 
     
  
  
  
  
   
 
  
Template Sequence  VKPLALRLMLQLVIVVALVVYVIYGFV
Template Known Secondary structure 

S
Template Predicted Secondary structure 


Template SS confidence 


























   84.....90.........100.........110
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions