Job Description P0A8Q0 Confidence 68.72% Date Wed Jan 25 15:20:18 GMT 2012 Rank 5 Aligned Residues 97 % Identity 13% Template c1yq3C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:succinate dehydrogenase cytochrome b, large subunit; PDBTitle: avian respiratory complex ii with oxaloacetate and ubiquinone Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		L	R	E	G	T	A	V	P	A	V	W	F	S	I	E	L	I	F	G	L	F	A	L	K	N	G	P	E	A	W	A	G	F	V	D	F	L	Q	N	P	.	.	V	I	V	I	I	N	L	I	T	L	A	A	A	L	L	H	T	K	T	W	F	E	L	A	P	K	A	A	N	I	I	V	K	D	E	K	M	G
Query Conservation																																										.	.
Alig confidence																																										.	.																									.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		T	H	R	G	T	G	V	A	L	S	L	G	V	S	L	F	S	L	A	A	L	L	L	P	E	Q	F	P	H	Y	V	A	V	V	K	S	L	S	L	S	P	A	L	I	Y	S	A	K	F	A	L	V	F	P	L	S	Y	H	T	W	N	G	I	R	H	L	.	.	.	.	.	V	W	D	M	G	K	G	F	K
Template Known Secondary structure																									S	S											T	T																														.	.	.	.	.				T	T		S		S
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	P	I	I	K	S	L	W	A	V	T	V	V	A	T	I	V	I	L	F	V	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	Q	V	E	Q	S	G	V	V	V	L	I	L	T	L	L	S	S	A	G	I	A	A
Template Known Secondary structure																								T	T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions