 |
Job Description | P09154 | Confidence | 2.14% | Date | Thu Jan 5 11:02:02 GMT 2012 |
Rank | 69 | Aligned Residues | 28 |
% Identity | 43% | Template | c3h0mU_ |
PDB info |
PDB header:ligase | Chain: U: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit c; |
PDBTitle: structure of trna-dependent amidotransferase gatcab from2 aquifex aeolicus
|
Resolution | 2.80 Å |
|
  |   |
97 | . | . | 100 | . | |
|
|
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | E | D | E | . |
. |
. |
. |
L | K | Q | Y | N | L | W | L | D | Y | L | E | A | L | E | L | V | D | T | S | S | A | P |
Query Conservation |   |
|
|   |   |
| . | . | . | . |   |   |   |
|   |   |
|   |   |
|
|   |   |
|   |
|
|
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |
|
|
|   |   |
|
|
Template Sequence |   |
L | K | E | E | E | I | E | V | F | Q | K | Q | L | S | D | I | L | D | F | I | D | Q | L | K | E | L | D | T | E | N | V | E |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | G | G | G | S |
|
| T | T |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|