 |
Job Description | P37326 | Confidence | 33.26% | Date | Thu Jan 5 11:55:12 GMT 2012 |
Rank | 41 | Aligned Residues | 59 |
% Identity | 17% | Template | d1q08a_ |
SCOP info | Putative DNA-binding domain
| Putative DNA-binding domain
| DNA-binding N-terminal domain of transcription activators
|
Resolution | 1.90 |
|
 |
  |   |
327 | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | H | E | F | S | T | I | M | N | E | H | E | W | P | A | D | A | I | E | V | Q | L | . |
. |
. |
. |
. |
. |
. |
A | H | A | N | G | G | S | V | R | G | I | Y | N | H | A | Q | Y | L | D | K | R | R | E | M | M | Q | W | W | A | D | W | L | D | E | K | V | E |
Query Conservation |   |
|
|
|   |
|
|   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |
| . | . | . | . | . | . | . |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   |
|   |
|
|
|
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
R | L | K | F | I | R | H | A | R | Q | L | G | F | S | L | E | S | I | R | E | L | L | S | I | R | I | D | P | E | H | H | T | C | Q | E | S | K | G | I | V | Q | E | R | L | Q | E | V | E | A | R | I | A | E | L | Q | S | M | Q | R | S | L | Q | R | L | N | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
47 | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|