Job Description P37326 Confidence 99.70% Date Thu Jan 5 11:55:12 GMT 2012 Rank 11 Aligned Residues 184 % Identity 14% Template d1f44a2 SCOP info DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Lambda integrase-like, catalytic core Resolution 2.05

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		R	K	K	N	F	P	F	L	P	A	D	Q	I	P	A	F	N	K	A	L	A	T	F	S	.	.	G	S	I	V	S	L	I	A	T	K	V	L	R	Y	T	A	L	R	T	K	E	L	R	S	M	L	W	K	N	V	D	F	E	N	R	I	I	T	I	D	A	S	V	M	K	G	R	K	I	H	V	V	P	M
Query Conservation																										.	.
Alig confidence																										.	.
Template Conservation
Template Sequence		R	A	K	Q	A	L	A	F	E	R	T	D	F	D	Q	V	R	S	L	M	E	N	S	D	R	C	Q	D	I	R	N	L	A	F	L	G	I	A	Y	N	T	L	L	R	I	A	E	I	A	R	I	R	V	K	D	I	S	R	T	D	G	G	R	M	L	I	H	I	G	R	G	V	E	K	A	L	S	L	G	V
Template Known Secondary structure																						T	T																														B	G	G	G					G	G	G
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.							.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.													.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																								.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	Q	V	V	E	L	L	T	T	L	S	S	I	T	K	P	V	S	E	F	V	.	.	.	.	.	.	F	A	G	R	N	D	K	K	K	P	I	C	E	N	A	V	L	L	V	I	K	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	E	G	L	E	S	G	H	G	F	R	H	E	F	S	T
Query Conservation																								.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	K	L	V	E	R	W	I	S	V	S	G	V	A	D	D	P	N	N	Y	L	F	C	R	V	R	K	N	G	V	A	A	P	S	A	T	S	Q	L	S	T	R	A	L	E	G	I	F	E	A	T	H	R	L	I	Y	G	A	K	D	D	S	G	Q	R	Y	L	A	W	S	G	H	S	A	R	V	G	A	A	R
Template Known Secondary structure														G	G	G	S	T	T	S	B	S	S			B		T	T	S		B				S	S																						S			T	T			T	T	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	N	E	H	E	W	P	A	D	A	I	E	V	Q	L	A	H	A	N	G	G	S	V	R	G	I	Y	N	H	A	Q	Y	L	D	K	R	R	E	M	M	Q	W	W	A	D
Query Conservation
Alig confidence																												.					.
Template Conservation																												.					.
Template Sequence		D	M	A	R	A	G	V	S	I	P	E	I	M	Q	A	G	G	W	T	N	V	N	I	V	M	N	.	F	I	R	N	.	L	D	S	E	T	G	A	M	V	R	L	L	E	D
Template Known Secondary structure						T	T											T										.		T	T	T	.			S										T	T
Template Predicted Secondary structure																												.					.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions