Return to main results Retrieve Phyre Job Id

Job DescriptionP37326
Confidence99.67%DateThu Jan 5 11:55:12 GMT 2012
Rank12Aligned Residues174
% Identity15%Templated1a0pa2
SCOP infoDNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Lambda integrase-like, catalytic core
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   197..200.........210.........220.........230.........240.........250.........260.........270......
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  FPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVE
Query Conservation                                     
 
                                          
Alig confidence 















































































Template Conservation 
 

 

   

           
      
   



  

  
   

                              
Template Sequence  KDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVYWLE
Template Known Secondary structure 




S
TTS


TT
BGGGTTTT
SSS


Template Predicted Secondary structure 





































Template SS confidence 















































































   111........120.........130.........140.........150.........160.........170.........180.........190
 
   277..280.........290.........300.... .....310.........320.........330.........340.........350
Predicted Secondary structure 
















......














Query SS confidence 



























. . . . . .













































Query Sequence  LLTTLSSITKPVSEFVFAGRNDKKKPIC. . . . . . ENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAH
Query Conservation                              ......        
  
     
 
 



 

 
   

    
   


Alig confidence 



























......













































Template Conservation                                                       
  
 
  
 
   
     
   


Template Sequence  TYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLSD
Template Known Secondary structure  TTT



BSSB
TTSSB

TT

GGG


SS
GGGSS



Template Predicted Secondary structure 






































Template SS confidence 















































































   191........200.........210.........220.........230.........240.........250.........260.........270
 
   351........360.........370....
Predicted Secondary structure 

Query SS confidence 























Query Sequence  ANGGSVRGIYNHAQYLDKRREMMQ
Query Conservation       
   
 
       
    
Alig confidence 

...








.








Template Conservation   
...

  
    . 
      
Template Sequence  LS. . . TTQIYTHVA. TERLRQLHQ
Template Known Secondary structure 

....
Template Predicted Secondary structure  ...

.
Template SS confidence 























   273. .....280... ......290..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions