Job Description P37326 Confidence 98.69% Date Thu Jan 5 11:55:12 GMT 2012 Rank 24 Aligned Residues 103 % Identity 14% Template c3lysC_ PDB info PDB header:recombination Chain: C: PDB Molecule:prophage pi2 protein 01, integrase; PDBTitle: crystal structure of the n-terminal domain of the prophage2 pi2 protein 01 (integrase) from lactococcus lactis,3 northeast structural genomics consortium target kr124f Resolution 2.80 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		S	N	N	N	S	F	S	A	I	Y	K	E	W	Y	E	H	.	K	K	Q	V	W	S	V	G	Y	A	T	E	L	A	K	M	F	D	D	D	I	L	P	I	I	G	G	L	E	I	Q	D	I	E	P	M	Q	L	L	E	V	I	R	R	F	E	D	R	G	A	M	E	R	A	N	K	A	R	R	R	C	G	E
Query Conservation																		.
Alig confidence																		.																			.
Template Conservation																																					.
Template Sequence		P	I	K	Q	E	I	S	E	Y	F	K	D	W	X	E	L	Y	K	K	N	A	I	D	E	X	T	Y	K	G	Y	E	Q	T	L	K	.	Y	L	K	T	Y	X	P	N	V	L	I	S	E	I	T	A	S	S	Y	Q	R	A	L	N	K	F	A	E	T	H	A	K	A	S	T	K	G	F	H	T	R	V	R	A
Template Known Secondary structure					S	B													T	T	T	T	S														.						S	S	S		B	T	T	T															T	T	S
Template Predicted Secondary structure																																					.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	R	Y	A	I	V	T	G	R	A	K	Y	N	P	A	P	D	L	A	D	A	M	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	Q	C	L	I	E	E	G	R	L	Q	K	D	F	T	T	R	A	V	V	K	G	L	E
Template Known Secondary structure										T		S	S	S		S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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