Job Description P37326 Confidence 99.84% Date Thu Jan 5 11:55:12 GMT 2012 Rank 8 Aligned Residues 93 % Identity 37% Template c3ju0A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:phage integrase; PDBTitle: structure of the arm-type binding domain of hai7 integrase Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	V	K	Q	I	E	A	A	K	P	K	E	K	P	Y	R	L	L	D	G	N	G	L	Y	L	Y	V	P	V	S	G	K	K	V	W	Q	L	R	Y	K	I	D	G	K	E	K	I	L	T	V	G	K	Y	P	L	M	T	L	Q	E	A	R	D	K	A	W	T	A	R	K	D	I	S	V	G	I	D	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	D	S	K	V	K	N	A	K	S	L	E	K	E	Y	K	L	T	D	G	F	G	M	H	L	L	V	H	P	N	G	S	K	Y	W	R	L	S	Y	R	F	E	K	K	Q	R	L	L	A	L	G	V	Y	P	A	V	S	L	A	D	A	R	Q	R	R	D	E	A	K	K	L	L	A	A	G	I	D	P	S
Template Known Secondary structure														S	S								T	T							T	T	S											T	T											T	T	S																		T	T			G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	K	K	A	S	S	N	N	N	S	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	K	Q	A	D	N	K	T	I	Q	E	K
Template Known Secondary structure		G	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions