Job Description P37326 Confidence 99.80% Date Thu Jan 5 11:55:12 GMT 2012 Rank 9 Aligned Residues 76 % Identity 38% Template c3jtzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: structure of the arm-type binding domain of hpi integrase Resolution 1.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	V	K	Q	I	E	A	A	K	P	K	E	K	P	Y	R	L	L	D	G	N	G	L	Y	L	Y	V	P	V	S	G	K	K	V	W	Q	L	R	Y	K	I	D	G	K	E	K	I	L	T	V	G	K	Y	P	L	M	T	L	Q	E	A	R	D	K	A	W	T	A	R	K	D	I	S	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	D	A	K	I	R	T	L	K	P	S	D	K	P	F	K	V	S	D	S	H	G	L	Y	L	L	V	K	P	G	G	S	R	H	W	Y	L	K	Y	R	I	S	G	K	E	S	R	I	A	L	G	A	Y	P	A	I	S	L	S	D	A	R	Q	Q	R	E	G	I	R	K	M	L	A	L	N
Template Known Secondary structure														S	S							S	T	T							T	T	S											T	T										T	T	T	S																	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions