 |
Job Description | P37326 | Confidence | 15.33% | Date | Thu Jan 5 11:55:12 GMT 2012 |
Rank | 56 | Aligned Residues | 44 |
% Identity | 18% | Template | c3adiC_ |
PDB info |
PDB header:gene regulation/rna | Chain: C: PDB Molecule:f21m12.9 protein; |
PDBTitle: structure of arabidopsis hyl1 and its molecular implications for mirna2 processing
|
Resolution | 3.20 Å |
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | L | Y | V | P | V | S | G | K | K | V | W | Q | L | R | Y | K | I | D | G | K | E | K | I | L | T | V | G | . |
K | Y | P | L | M | T | L | Q | E | A | R | D | K | A | W | T | A | R | K | D |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |
|   |
|   |   |
|   |   |   |   |
|
|   |   |   |   |   |
|
| . |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . |
|
|
|   |
|
|   |   |
|
|   |   |
|
|   |
Template Sequence |   |
I | V | K | E | G | P | S | H | K | S | L | F | Q | S | T | V | I | L | D | G | V | R | Y | N | S | L | P | G | F | F | . |
. |
. |
. |
N | R | K | A | A | E | Q | S | A | A | E | V | A | L | R |
Template Known Secondary structure |   |
 |  |  |  | S | S | T | T | S |
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |
|
| S |
| B | S | . | . | . | . | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|