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Job DescriptionP37326
Confidence97.26%DateThu Jan 5 11:55:12 GMT 2012
Rank29Aligned Residues158
% Identity12%Templatec2v6eB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protelemorase; PDBTitle: protelomerase telk complexed with substrate dna
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   202.......210.........220.........230.........240.........250.........260.. .......270........
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Query Sequence  ADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKG. . . RKIHVVPMSDQVVELL
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Template Sequence  YDIINKPIVSFDLTTRRGMAPLAFALAALSGRRMIEIMLQGEFSVAGKYTVTFLGQAKKRSEDKGISRKIYTLCDATLFV
Template Known Secondary structure  S
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SSTGGG


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   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   279280.........290... ......300.... .....310.........320.........330...... .
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Query Sequence  TTLSSITKPVSEFVF. . . . . . AGRNDKKKPIC. . . . . . ENAVLLVIKQIGYEGLESGHGFRHEFSTIMNE. . . . . . . . . H
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Template Sequence  SLVNELRSCPAAADFDEVIKGYGENDTRSENGRINAILATAFNPWVKTFLGDDRRVYKDSRAIYARIAYEMFFRVDPRWK
Template Known Secondary structure  TTSGGGTTTT
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TTTTTSGGGT
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   323......330.........340.........350.........360.........370.........380.........390.........400..
 
   338.340.. .......350.........360
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Query Sequence  EWPAD. AIEVQLAHANGGSVRGIY
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Template Sequence  NVDEDVFFMEILGHDDEN. TQLHY
Template Known Secondary structure  TS
T
SSTT.GGGSS
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   403......410.........420 .....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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