Job Description P37326 Confidence 98.64% Date Thu Jan 5 11:55:12 GMT 2012 Rank 25 Aligned Residues 109 % Identity 11% Template c2kkpA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:phage integrase; PDBTitle: solution nmr structure of the phage integrase sam-like2 domain from moth 1796 from moorella thermoacetica.3 northeast structural genomics consortium target mtr39k4 (residues 64-171). Resolution UNK

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																		.																																																			.
Query SS confidence																		.																																																			.
Query Sequence		S	S	N	N	N	S	F	S	A	I	Y	K	E	W	Y	E	.	H	K	K	Q	V	W	S	V	G	Y	A	T	E	L	A	K	M	F	D	D	D	I	L	P	I	I	G	G	L	E	I	Q	D	I	E	P	M	Q	L	L	E	V	I	R	R	F	E	D	R	G	.	A	M	E	R	A	N	K	A	R	R	R	C
Query Conservation																		.																																																			.
Alig confidence																		.																																																			.
Template Conservation
Template Sequence		E	P	S	K	I	T	V	E	Q	W	L	N	R	W	L	T	D	Y	A	K	P	H	L	R	Q	S	T	W	E	S	Y	E	T	V	L	R	L	H	V	I	P	T	L	G	S	I	P	L	K	K	L	Q	P	A	D	I	Q	R	L	Y	A	S	K	L	E	S	G	L	S	P	T	R	V	R	Y	I	H	V	V	L
Template Known Secondary structure			S			S														T	S				S					S																T	S		T	T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	V	F	R	Y	A	I	V	T	G	R	A	K	Y	N	P	A	P	D	L	A	D	A	M	K	G	Y	R	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	E	A	M	S	Q	A	R	E	S	G	L	L	L	Q	N	P	T	E	A	A	K	P	P	R	H	P	L	E	H	H
Template Known Secondary structure										T	T	T	S		S	S		G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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