 |
Job Description | P37326 | Confidence | 24.79% | Date | Thu Jan 5 11:55:12 GMT 2012 |
Rank | 45 | Aligned Residues | 43 |
% Identity | 23% | Template | c2khxA_ |
PDB info |
PDB header:gene regulation,nuclear protein | Chain: A: PDB Molecule:ribonuclease 3; |
PDBTitle: drosha double-stranded rna binding motif
|
Resolution | UNK |
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | R | L | L | D | G | N | G | L | Y | L | Y | V | P | V | S | G | K | K | V | W | Q | L | R | Y | K | I | D | G | K | E | K | I | L | T | V | G | K | Y | P | L | M | T | L | Q | E | A | R | D | K | A | W | T |
Query Conservation |   |
  |   |   |   |
|   |   |
|
|   |
|   |
|   |   |   |
|   |
|   |
|   |   |
|   |   |   |   |
|
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
| . | . | . | . | . | . |
|   |
|   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |
|   |
|   | . | . | . | . |
|
|
|   |
|
|   |   |
|
|   |
Template Sequence |   |
Y | K | T | L | Q | T | V | G | . |
. |
. |
. |
. |
. |
P | S | H | A | R | T | Y | T | V | A | V | Y | F | K | G | E | R | I | G | C | G | K | G | P | . |
. |
. |
. |
S | I | Q | Q | A | E | M | G | A | A | M |
Template Known Secondary structure |   |
 |  |  |
|
|
|
|
| . | . | . | . | . | . | S | S | S |
|
|
|  |  |  |  |  |  |  | T | T |  |  |
|
|
|  |  |  | S | . | . | . | . | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1284 | . | . | . | . | . | 1290 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 1300 | . | . | . | . | . | . | . | . | . | 1310 | . | . | . | . | . | |
|
|
|
. | . | . | . | 1320 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|