Job Description P37326 Confidence 93.93% Date Thu Jan 5 11:55:12 GMT 2012 Rank 30 Aligned Residues 145 % Identity 14% Template c2f4qA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:type i topoisomerase, putative; PDBTitle: crystal structure of deinococcus radiodurans topoisomerase ib Resolution 1.75 Å

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		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		V	S	L	I	A	T	K	V	L	R	Y	T	A	L	R	T	K	.	E	L	R	S	M	L	W	K	N	V	D	F	E	N	R	I	I	T	I	D	A	S	V	M	K	G	R	K	I	H	V	V	P	M	S	D	Q	V	V	E	L	L	T	T	L	S	S	I	T	K	P	V	S	E	F	V	F	A	G	R	N	D
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		V	X	A	L	X	T	R	L	L	H	V	A	R	F	R	V	T	Y	G	L	S	T	L	R	Q	R	H	V	V	V	D	G	N	T	V	T	F	R	F	K	G	K	H	G	V	S	Q	H	K	A	T	S	D	R	T	L	A	A	N	X	Q	K	L	L	D	L	P	G	P	W	L	F	Q	T	V	D	A	G	G	G
Template Known Secondary structure																					G	G	G		B	G	G	G					T	T									G	G	G																					T	S		S	S	B	S	S					S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340																			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	K	P	I	C	E	N	A	V	L	L	V	I	K	Q	I	G	Y	E	G	L	E	S	G	H	G	F	R	H	E	F	S	T	I	M	N	E	H	E	W	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	A	I	E	V	Q	L	A	H	A	N	G	G	S	V	R	G	I	Y
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																					.	.																																																		.
Template Sequence		E	R	R	R	I	H	S	T	E	L	N	A	Y	L	R	E	V	I	G	.	.	P	F	T	A	K	D	F	R	T	W	G	G	T	L	L	A	A	E	Y	L	A	Q	Q	G	T	E	S	S	E	R	Q	A	K	K	V	L	V	D	C	V	K	F	V	A	D	D	L	G	N	.	T	P	A	V	T	R	G	S	Y
Template Known Secondary structure																				T	.	.	T	S																									S	S																				T		.									T
Template Predicted Secondary structure																					.	.																																																		.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.
		361	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	A	Q	Y	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	C	P	V	I	F	D
Template Known Secondary structure		S		T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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