Job Description P37326 Confidence 99.85% Date Thu Jan 5 11:55:12 GMT 2012 Rank 7 Aligned Residues 259 % Identity 14% Template c1a0pA_ PDB info PDB header:dna recombination Chain: A: PDB Molecule:site-specific recombinase xerd; PDBTitle: site-specific recombinase, xerd Resolution 2.50 Å

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		95	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure														.	.																									.
Query SS confidence														.	.																									.
Query Sequence		A	I	Y	K	E	W	Y	E	H	K	K	Q	.	.	V	W	S	V	G	Y	A	T	E	L	A	K	M	F	D	D	D	I	L	P	I	I	G	G	.	L	E	I	Q	D	I	E	P	M	Q	L	L	E	V	I	R	R	F	E	D	R	G	A	M	E	R	A	N	K	A	R	R	R	C	G	E	V	F	R	Y	A
Query Conservation														.	.																									.
Alig confidence														.	.																									.																		.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.
Template Sequence		A	R	I	E	Q	F	L	D	A	L	W	L	E	K	N	L	A	E	N	T	L	N	A	Y	R	R	D	L	S	M	M	V	E	W	L	H	H	R	G	L	T	L	A	T	A	Q	S	D	D	L	Q	A	L	L	A	E	.	.	.	.	.	.	R	L	S	S	A	R	L	L	S	A	V	R	R	L	F	Q	Y	L
Template Known Secondary structure														T	T		S																						T	S			T	T	T												S	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	T	G	R	A	K	Y	N	P	A	P	D	L	A	D	A	M	K	G	Y	R	K	K	N	F	P	F	L	P	A	D	Q	I	P	A	F	N	K	A	L	A	T	F	S	G	S	I	V	S	L	I	A	T	K	V	L	R	Y	T	A	L	R	T	K	E	L	R	S	M	L	W	K	N	V	D	F	E	N	R
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	E	K	F	R	E	D	D	P	S	A	H	.	.	.	.	.	.	.	.	.	.	.	L	K	D	L	S	E	A	Q	V	E	R	L	L	Q	A	P	L	I	D	Q	P	L	E	L	R	D	K	A	M	L	E	V	L	Y	A	T	G	L	R	V	S	E	L	V	G	L	T	M	S	D	I	S	L	R	Q	G
Template Known Secondary structure				T	T	S	S	S	S		T	T	S		.	.	.	.	.	.	.	.	.	.	.																S		T	T	S																								T	T		B	G	G	G			T	T	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.												100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.							.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.
Query Sequence		I	I	T	I	D	A	S	V	M	K	G	R	K	I	H	V	V	P	M	S	D	Q	V	V	E	L	L	T	T	L	S	.	.	.	.	.	.	S	I	T	K	P	V	S	E	F	V	F	A	G	R	N	D	K	K	K	P	I	C	E	N	A	V	L	L	V	I	K	Q	I	G	Y	E	G	L	E	S	G	H	G
Query Conservation																																	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	R	V	I	G	K	G	N	K	E	R	L	V	P	L	G	E	E	A	V	Y	W	L	E	T	Y	L	E	H	G	R	P	W	L	L	N	G	V	S	I	D	V	L	F	P	S	Q	R	A	Q	Q	M	T	R	Q	T	F	W	H	R	I	K	H	Y	A	V	L	A	G	I	D	S	E	K	L	S	P	H	V
Template Known Secondary structure								S	S	S																						T						T	T					B	S	S	B		T	T	S	S	B																	T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	H	E	F	S	T	I	M	N	E	H	E	W	P	A	D	A	I	E	V	Q	L	A	H	A	N	G	G	S	V	R	G	I	Y	N	H	A	Q	Y	L	D	K	R	R	E	M	M	Q
Query Conservation
Alig confidence																													.	.	.										.
Template Conservation																													.	.	.										.
Template Sequence		L	R	H	A	F	A	T	H	L	L	N	H	G	A	D	L	R	V	V	Q	M	L	L	S	D	L	S	.	.	.	T	T	Q	I	Y	T	H	V	A	.	T	E	R	L	R	Q	L	H	Q
Template Known Secondary structure															S	S		G	G	G	S	S							.	.	.										.
Template Predicted Secondary structure																													.	.	.										.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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