 |
Job Description | P0AF20 | Confidence | 97.80% | Date | Thu Jan 5 11:24:56 GMT 2012 |
Rank | 107 | Aligned Residues | 56 |
% Identity | 9% | Template | d2fbha1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
|
Resolution | 1.80 |
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | S | A | A | V | Y | R | L | I | D | Q | Y | G | . |
P | I | S | R | I | Q | I | A | E | Q | S | Q | L | A | P | A | S | V | T | K | I | T | R | Q | L | I | E | R | G | L | I | K | E | V | D | Q | Q | A | S | T | G | G | R |
Query Conservation |   |
|   |   |   |
|
|   |   |
|   |   |   |   | . |   |   |
|
|   |
|
|
|   |   |
|
|
|
|   |   |
|
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |
|   |
|   |   |
Template Sequence |   |
A | R | W | L | V | L | L | H | L | A | R | H | R | D | S | P | T | Q | R | E | L | A | Q | S | V | G | V | E | G | P | T | L | A | R | L | L | D | G | L | E | S | Q | G | L | V | R | R | L | A | V | A | E | D | R | R | A | K |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |  |
| S | S |
|
| B |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
|
| B | T | T | B |
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|