Job Description P0AF20 Confidence 99.71% Date Thu Jan 5 11:24:56 GMT 2012 Rank 41 Aligned Residues 244 % Identity 14% Template d2ewsa1 SCOP info Ribonuclease H-like motif Actin-like ATPase domain Fumble-like Resolution 2.05

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	V	R	L	G	R	H	D	A	T	I	T	L	F	D	L	S	S	K	V	L	A	E	E	H	Y	P	L	P	E	R	T	Q	Q	T	L	E	H	A	L	L	N	A	I	A	Q	F	I	D	S	Y	Q	R	K	L	R	E	L	I	A	I	S	V	I	L	P	G	L	V	D	P	D	S	G	K	I	H	Y	M
Query Conservation
Alig confidence																		.														.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.														.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	I	D	A	G	G	T	L	I	K	I	V	Q	E	Q	.	D	N	Q	R	T	F	K	T	E	L	T	K	N	.	.	.	.	.	.	.	.	.	.	.	I	D	Q	V	V	E	W	L	N	Q	.	.	.	.	.	Q	Q	I	E	K	L	C	L	T	G	G	N	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	S									.	S	S									G	G	G	.	.	.	.	.	.	.	.	.	.	.										T	.	.	.	.	.	S			S						S	T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.														.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.												.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		P	H	I	Q	V	E	N	W	G	L	V	E	A	L	E	E	R	F	K	V	T	C	F	V	G	H	D	I	R	S	L	A	L	A	E	H	Y	F	.	.	G	A	S	Q	D	C	E	D	S	I	L	V	R	V	H	R	G	T	G	A	G	I	I	S	N	G	R	I	F	I	G	R	N	G	N	V	G	E	I	G
Query Conservation																																								.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																													.	.																																					.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																																																			.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	A	G	V	I	A	E	N	I	N	I	P	A	Q	I	F	V	E	F	D	A	A	S	Q	G	L	G	I	L	L	K	E	Q	G	H	D	L	A	D	Y	I	F	A	N	V	G	T	G	T	S	L	H	Y	F	D	G	Q	S	Q	R	R	V	G	G	I	G	T	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.						T	T	S	S	S																						T	T				S								S	S	S								S	S									S		.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																																			.	.	.	.
Template SS confidence
												54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280										.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.
Query Sequence		H	I	Q	V	E	P	L	G	E	R	C	H	C	G	N	F	G	C	L	E	T	I	A	A	N	A	A	I	E	Q	R	V	L	N	.	.	.	.	.	.	.	.	.	L	L	K	Q	G	Y	Q	S	R	V	P	L	D	D	C	T	I	K	T	I	C	K	A	A	N	K	G	D	S	L	A	S	E	V	I	E	Y
Query Conservation																																				.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	G	G	G	M	I	Q	G	L	G	Y	L	L	S	Q	I	T	D	Y	K	Q	L	T	D	M	A	Q	H	G	D	R	N	T	I	D	L	K	V	R	H	I	I	P	G	D	L	T	A	A	N	F	G	H	V	L	H	H	L	D	A	D	F	T	P	S	N	K	L	A	A	V	I	G	V
Template Known Secondary structure		.	.	.	.	.	.	.	S																									T	T				T	T	T				T	T	T				T	T	S				T	T	T	T	G	G	G		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		V	G	R	H	L	G	K	T	I	A	I	A	I	N	L	F	N	P	Q	K	I	V	I	A	G	E	I	T	E	A	D	K	V	L	L	P	A	I	E	S	C	I	N	T	Q	A	L	K	A	F	R	T	N	L	P	V	V	R	S	E	L	D	.	H	R	S	A	I	G	A	F	A	L
Query Conservation																																																																.
Alig confidence																																															.	.	.	.	.	.	.											.
Template Conservation																																															.	.	.	.	.	.	.
Template Sequence		V	G	E	V	V	T	T	M	A	I	T	V	A	R	E	F	K	T	E	N	I	V	Y	I	G	S	S	F	H	N	N	A	L	L	R	K	V	V	E	D	Y	T	V	L	R	.	.	.	.	.	.	.	G	C	K	P	Y	Y	V	E	N	G	A	F	S	G	A	I	G	A	L	Y	L
Template Known Secondary structure																	T	T								S	G	G	G	T	T															T	.	.	.	.	.	.	.	T							T	T	G	G	G									T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.								.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions