Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF20
Confidence95.04%DateThu Jan 5 11:24:56 GMT 2012
Rank271Aligned Residues56
% Identity18%Templated1tw3a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Plant O-methyltransferase, N-terminal domain
Resolution2.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60........
Predicted Secondary structure 














Query SS confidence 
























































Query Sequence  VDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQLAPASVTKITRQLIERGLIKEVDQQ
Query Conservation     

  
   

  
      

 


  



  


 

  
   


 
    
Alig confidence 















.







































Template Conservation    

  

 
 


 
.  

 
  


   
     
 



 
   

  
    
Template Sequence  PMVVRTAATLRLVDHI. LAGARTVKALAARTDTRPEALLRLIRHLVAIGLLEEDAPG
Template Known Secondary structure  TT.TT

BT

TTSTT
Template Predicted Secondary structure 



.
















Template SS confidence 
























































   28.30.........40... ......50.........60.........70.........80...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions