Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF20
Confidence100.00%DateThu Jan 5 11:24:56 GMT 2012
Rank14Aligned Residues295
% Identity14%Templated1sz2a1
SCOP infoRibonuclease H-like motif Actin-like ATPase domain Glucokinase
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   86...90.........100.........110.........120.........130.........140.........150.........160.....
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  FHAIGVRLGRHDATITLFDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDPDSGKI
Query Conservation     





       
 

 
 

                  
   
             
  


  

 
    
 
Alig confidence 





































.....













...













...


Template Conservation   
 
  




 

 

 
     
             .....    
         ...    


  

 

...   
Template Sequence  KYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPS. . . . . LEAVIRVYLEEHKV. . . EVKDGCIAIACPIT. . . GDW
Template Known Secondary structure 
TTTTT

GGG
S
.....S

...


SS


...SS
Template Predicted Secondary structure 












.....


...




...

Template SS confidence 















































































   3......10.........20.........30.........40 .........50.... .....60........ .70.
 
   166...170.........180.........190.........200.. .......210.........220.........230.......
Predicted Secondary structure 














........
















Query SS confidence 




































. . . . . . . .


































Query Sequence  HYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALA. . . . . . . . EHYFGASQDCEDSILVRVHRGTGAGIISNGRIFIG
Query Conservation              
   
      

 
 

  
 
 
........
   
          
  
 


   
  
    
Alig confidence 







.



























........


































Template Conservation          .               
   

  
 
              
            

 
 
 
         
Template Sequence  VAXTNHTW. AFSIAEXKKNLGFSHLEIINDFTAVSXAIPXLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVDKR
Template Known Secondary structure 

SSS

.
T
SGGG

GGG
SS



TT

SSSTT
Template Predicted Secondary structure 




.






































Template SS confidence 















































































   72....... 80.........90.........100.........110.........120.........130.........140.........150
 
   238.240.........250...... ...260.........270.........280.........290.........300.........
Predicted Secondary structure 














........





















Query SS confidence 


















. . . . . . . .




















































Query Sequence  RNGNVGEIGHIQVEPLGER. . . . . . . . CHCGNFGCLETIAANAAIEQRVLNLLKQGYQSRVPLDDCTIKTICKAANKGDS
Query Conservation      





      
  ........  

  
 

   
   
                         
   
  

 
Alig confidence 


















........
































..

















Template Conservation    
 


 

                       
  
   
   
               ..               

 
Template Sequence  WVSLPGEGGHVDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLP. . ENLKPKDITERALADSCT
Template Known Secondary structure 

GGGSB



SSSS
BGGGTSSTT


..



T

Template Predicted Secondary structure 


































..







Template SS confidence 















































































   151........160.........170.........180.........190.........200.........210 .........220........
 
   310.........320.........330..... ....340.........350.... .....360.........370.........380.....
Predicted Secondary structure 

.



...












Query SS confidence 

























.


















. . .






























Query Sequence  LASEVIEYVGRHLGKTIAIAINLFNP. QKIVIAGEITEADKVLLPA. . . IESCINTQALKAFRTNLPVVRSELDHRSAIG
Query Conservation   
  

      

  
  
   
 
.  


 
 
          ...
   
             
  
        
Alig confidence 

























.


















...






























Template Conservation   
          

           
   






                               
       
 
 
Template Sequence  DCRRALSLFCVIXGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLG
Template Known Secondary structure  T
TT
SSSGGGSS

GGGTT



S
Template Predicted Secondary structure 























Template SS confidence 















































































   229230.........240.........250.........260.........270.........280.........290.........300........
 
   386...390....
Predicted Secondary structure 
Query SS confidence 








Query Sequence  AFALVKRAM
Query Conservation 

 
     
Alig confidence 








Template Conservation 

  
   
Template Sequence  SGAHLRQTL
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 








   309310.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions