Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF20
Confidence95.68%DateThu Jan 5 11:24:56 GMT 2012
Rank253Aligned Residues95
% Identity8%Templatec3tsuA_
PDB info PDB header:transferaseChain: A: PDB Molecule:transcriptional regulatory protein; PDBTitle: crystal structure of e. coli hypf with amp-pnp and carbamoyl phosphate
Resolution1.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   297..300.........310.........320.........330.........340.........350.........360.........370......
Predicted Secondary structure 

















Query SS confidence 















































































Query Sequence  IKTICKAANKGDSLASEVIEYVGRHLGKTIAIAINLFNPQKIVIAGEITEADKVLLPAIESCINTQALKAFRTNLPVVRS
Query Conservation     
   
  

  
  

      

  
  
   
 
  


 
 
          
   
             
  
Alig confidence 
















































.

























....
Template Conservation     

       



 

 

   
           
   







.

  
   
   
    
      
 ....
Template Sequence  WQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVI. HNRLLRARLAHYLADFTLLFPQSLPA. . . .
Template Known Secondary structure 



TT

SGGG.G
TTTS


SS
S....
Template Predicted Secondary structure 








.









....
Template SS confidence 















































































   651........660.........670.........680.........690......... 700.........710.........720.....
 
   377..380.. .......390........
Predicted Secondary structure 



.


Query SS confidence 





.















Query Sequence  ELDHRS. AIGAFALVKRAMLNGI
Query Conservation        .  


 
       
 
Alig confidence  ..



.















Template Conservation  ..









  
  
   

Template Sequence  . . GDGGLSLGQGVIAAARWLAGE
Template Known Secondary structure  ..SGGGTT
Template Predicted Secondary structure  ..




Template SS confidence 






















   726...730.........740......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions