Job Description P0AF20 Confidence 96.32% Date Thu Jan 5 11:24:56 GMT 2012 Rank 231 Aligned Residues 259 % Identity 15% Template c3smpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pantothenate kinase 1; PDBTitle: monoclinic crystal structure of human pantothenate kinase 1 alpha Resolution 1.90 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																																														.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	V	R	L	G	R	H	D	A	T	I	T	L	F	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	K	V	L	A	E	E	H	Y	P	L	P	E	R	T	Q	Q
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	G	M	D	I	G	G	T	L	V	K	L	V	Y	F	E	P	K	D	I	T	A	E	E	E	Q	E	E	V	E	N	L	K	S	I	R	K	Y	L	T	S	N	T	A	Y	G	K	T	G	I	R	D	V	H	L	E	L	K	N	L	T	M	C	G	R	K	G	N	L	H	F	I	R	F	P	S	C	A	M	H
Template Known Secondary structure								S	S										S										S															S			T	T	T					G	G	G								T	T												G	G	G
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	E	H	A	L	L	N	A	I	A	Q	F	I	D	S	Y	Q	R	K	L	R	E	L	I	A	I	S	V	I	L	P	G	L	V	D	P	D	S	G	K	I	H	Y	M	P	H	I	Q	V	E	N	W	G	L	V	E	A	L	E	E	R	F	K	V	T	C	F	V	G	H	D	I	R	S	L	A	L	A	E
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	F	I	Q	M	G	S	E	.	.	.	.	.	.	.	.	.	K	N	F	S	S	L	H	T	T	L	C	A	T	G	G	G	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	E	E	D	F	R	M	I	A	D	L	Q	L	H	K	L	D	E	L	D	C	L	I	Q	G	L
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	T	T	G	G	G	T		S						S	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.										.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.																			.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		204	.	.																									.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	S	Q	D	C	E	D	S	I	L	V	R	V	H	R	G	T	G	A	G	I	I	S	N	G	R	I	F	I	G	R	N	G	N	V	G	E	I	G	H	I	Q	V	E	P	L	G	E	R	C	H	C
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	V	D	S	V	G	F	N	G	K	P	E	C	Y	Y	F	E	N	P	T	N	P	E	L	C	Q	K	K	P	Y	C	P	Y	P	M	L	L	V	N	M	G	S	G	V	S	I	L	A	V	Y	S	K	D	N	Y	K	R	V	T	G	T	S	L	G	G	G	T	F	L	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									B	T	T	B		S						S	T	T		T	T	T										S							S	S	S									T	T									S		S						.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.													280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310								.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Query Sequence		G	N	F	G	C	L	E	T	I	A	A	N	A	A	I	E	Q	R	V	L	.	.	.	.	.	.	.	.	.	.	.	.	N	L	L	K	Q	G	Y	Q	S	R	V	P	L	D	D	C	T	I	K	T	I	C	K	A	A	N	K	G	D	S	L	.	.	.	.	.	.	.	A	S	E	V	I	E	Y	V	G	R
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	C	C	L	L	T	G	C	E	T	F	E	E	A	L	E	M	A	A	K	G	D	S	T	N	V	D	K	L	V	K	D	I	Y	G	G	D	Y	E	R	F	G	L	Q	G	S	A	V	A	S	S	F	G	N	M	M	S	K	E	K	R	D	S	I	S	K	E	D	L	A	R	A	T	L	V	T	I	T	N
Template Known Secondary structure												S													G	G	G	T	S								S	S		B	G	G	G	T	B		T	T	S				T	T	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		H	L	G	K	T	I	A	I	A	I	N	L	F	N	P	Q	K	I	V	I	A	G	E	I	T	E	A	D	K	V	L	L	P	A	I	E	S	C	I	N	T	Q	A	L	K	A	F	R	T	N	L	P	V	V	R	S	E	L	D	.	H	R	S	A	I	G	A	F	A
Query Conservation																																																													.
Alig confidence																																													.	.	.	.													.
Template Conservation																																													.	.	.	.
Template Sequence		N	I	G	S	I	A	R	M	C	A	L	N	E	N	I	D	R	V	V	F	V	G	N	F	L	R	I	N	M	V	S	M	K	L	L	A	Y	A	M	D	F	W	S	.	.	.	.	K	G	Q	L	K	A	L	F	L	E	H	E	G	Y	F	G	A	V	G	A	L	L
Template Known Secondary structure															T								S	G	G	G	T	S		T														T	.	.	.	.	T	T	S				B			T	T	T	T
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.					.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions