Job Description P0AF20 Confidence 98.92% Date Thu Jan 5 11:24:56 GMT 2012 Rank 53 Aligned Residues 272 % Identity 14% Template c3p4iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetate kinase; PDBTitle: crystal structure of acetate kinase from mycobacterium avium Resolution 2.35 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.		.	.	.	.
Predicted Secondary structure																						.																																										.	.								.					.	.	.	.
Query SS confidence																						.																																										.	.								.					.	.	.	.
Query Sequence		N	F	H	A	I	G	V	R	L	G	R	H	D	A	T	I	T	L	F	D	.	L	S	S	K	V	L	A	E	E	H	Y	P	L	P	E	R	T	Q	Q	T	L	E	H	A	L	L	N	A	I	A	Q	F	I	D	S	Y	Q	R	K	L	R	.	.	E	L	I	A	I	S	V	.	I	L	P	G	.	.	.	.
Query Conservation																						.																																										.	.								.					.	.	.	.
Alig confidence																						.																																										.	.								.					.	.	.	.
Template Conservation
Template Sequence		A	R	R	V	L	V	I	N	S	G	S	S	S	L	K	F	Q	L	V	D	P	E	S	G	V	A	A	S	T	G	I	V	E	R	I	E	S	S	P	V	P	D	H	D	A	A	L	R	R	A	F	D	M	L	A	G	D	G	V	D	L	N	T	A	G	L	V	A	V	G	H	R	V	V	H	G	G	N	T	F
Template Known Secondary structure												S	S									T	T	T																S			S															T	T			T	T	T	T	T									S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
																																							157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	D	P	D	S	G	K	I	H	Y	M	P	H	I	Q	.	.	.	.	.	.	V	E	N	W	G	L	V	E	A	L	E	E	R	F	K	V	T	C	F	V	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	R	P	T	V	L	D	D	A	V	I	A	R	L	H	E	L	S	E	L	A	P	L	H	N	P	P	A	L	L	G	I	E	V	A	R	R	L	L	P	G	I	A	H	V	A	V	F	D	T	G	F	F	H	D	L	P	P	A	A	A	T	Y	A	I	D	R	E	L	A	D	R	W	Q	I	R	R	Y	G	F
Template Known Secondary structure			S													G	G	G	T	T	T		T	T	T																T	T	S							T	T	G	G	G	T	T									S	S									T		S				S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																																							.
Query SS confidence														.	.	.																																							.
Query Sequence		H	D	I	R	S	L	A	L	A	E	H	Y	.	.	.	F	G	A	S	Q	D	C	E	D	S	I	L	V	R	V	H	R	G	T	G	A	G	I	I	S	N	G	R	I	F	I	G	R	N	G	N	V	G	.	E	I	G	H	I	Q	V	E	P	L	G	E	R	C	H	C	G	N	F	G	C	L	E	T	I	A
Query Conservation														.	.	.																																							.
Alig confidence														.	.	.																																							.
Template Conservation
Template Sequence		H	G	T	S	H	R	Y	V	S	E	Q	A	A	A	F	L	D	R	P	L	R	G	L	K	Q	I	V	L	H	L	G	N	G	C	S	A	S	A	I	A	G	T	R	P	L	D	T	S	M	G	L	T	P	L	E	G	L	V	M	G	T	R	S	G	D	I	D	P	S	V	V	S	Y	L	C	H	T	A	G	M
Template Known Secondary structure																		T	S		G	G	G									S	S	S								T	T						S			S	S	T	T	S	S	S			S	S				S			T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		A	N	A	A	I	E	Q	R	V	L	N	L	L	K	Q	G	Y	Q	S	R	V	P	L	D	D	C	T	I	K	T	I	C	K	A	A	N	K	G	D	S	L	A	S	E	V	I	E	Y	V	G	R	H	L	G	K	T	I	A	I	A	I	N	L	F	N	.	P	Q	K	I	V	I	A	G	E	I	T	E	A	D
Query Conservation																																																																			.
Alig confidence																						.	.	.	.																																										.
Template Conservation																						.	.	.	.
Template Sequence		G	V	D	D	V	E	S	M	L	N	H	R	S	G	V	V	G	L	S	G	.	.	.	.	V	R	D	F	R	R	L	R	E	L	I	E	S	G	D	G	A	A	Q	L	A	Y	S	V	F	T	H	R	L	R	K	Y	I	G	A	Y	L	A	V	L	G	H	T	D	V	I	S	F	T	A	G	I	G	E	N	D
Template Known Secondary structure													S								S	.	.	.	.				T									T	T																											S	S												T	T
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.					270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	L	L	P	A	I	E	S	C	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	V	R	R	D	A	V	S	G	M	E
Template Known Secondary structure										T	T		G
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions