Job Description P0AF20 Confidence 100.00% Date Thu Jan 5 11:24:56 GMT 2012 Rank 4 Aligned Residues 303 % Identity 20% Template c3mcpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucokinase; PDBTitle: crystal structure of glucokinase (bdi_1628) from parabacteroides2 distasonis atcc 8503 at 3.00 a resolution Resolution 3.00 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	T	R	N	F	H	A	I	G	V	R	L	G	R	H	D	A	T	I	T	L	F	D	L	S	S	K	V	L	A	E	E	H	Y	P	L	P	E	R	T	Q	Q	T	L	E	H	A	L	L	N	A	I	A	Q	F	I	D	S	Y	Q	R	K	L	R	E	L	I	A	I	S	V	I	L	P	G	L	V	D	P
Query Conservation
Alig confidence																																																															.	.	.
Template Conservation																																																															.	.	.
Template Sequence		Y	T	N	D	N	R	I	V	X	T	L	D	A	G	G	T	N	F	V	F	S	A	I	Q	G	G	K	E	I	A	D	P	V	V	L	P	A	C	A	D	C	L	D	K	C	L	G	N	L	V	E	G	F	K	A	I	Q	A	G	L	P	.	.	.	E	A	P	V	A	I	S	F	A	F	P	G	P	A	D	Y
Template Known Secondary structure		T	T	T											S	S	S									T	T				S									T	T																		T	T		S	.	.	.	S											S	S			T
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.														.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure													.							.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.							.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	S	G	K	I	H	Y	M	P	H	I	.	Q	V	E	N	W	G	.	L	V	E	A	L	E	E	R	F	K	V	T	C	F	V	G	H	D	I	R	S	L	A	L	A	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	G	A	S	Q	D	C	E	D	S	I	L	V	R	V	H	R	G	T	G
Query Conservation													.							.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.							.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	G	I	I	G	D	L	P	N	F	P	S	F	R	G	G	V	A	L	G	P	F	L	E	D	I	F	G	I	P	V	F	I	N	N	D	G	S	L	F	A	Y	G	E	A	L	T	G	V	L	P	E	I	N	R	R	L	R	E	A	G	S	T	K	R	Y	K	N	L	L	G	V	T	L	G	T	G	F	G
Template Known Secondary structure		T	T	T						T	T		G	G	G	T	T		B												S																		T	S												T	T														S	S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	I	I	S	N	G	R	I	F	I	G	R	N	G	N	V	G	E	I	G	H	I	Q	V	E	P	L	G	E	R	C	H	C	G	N	F	G	C	L	E	T	I	A	A	N	A	A	I	E	Q	R	V	L	N	L	L	K	Q	G	Y	Q	S	R	V	P	L	D	D	C	T	I	K	T	I	C	K	A	A	N
Query Conservation
Alig confidence																																.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																																.																						.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	V	V	I	D	G	E	L	L	R	G	D	N	A	A	G	G	Y	V	W	C	L	R	N	K	K	Y	P	E	.	Y	I	V	E	E	S	V	S	I	R	A	V	X	R	V	Y	A	E	R	S	G	.	.	.	.	.	.	.	.	.	.	D	A	G	A	R	T	P	K	E	I	F	E	I	A	E	G	I	R
Template Known Secondary structure							T	T						T	T	S		T	T			T	T	S	B		S	S		T	T	.	S	B	G	G	G	T	S	S												S	S	.	.	.	.	.	.	.	.	.	.			S													T	S	S
Template Predicted Secondary structure																																.																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210											.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		306	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.
Predicted Secondary structure					.																																																																											.
Query SS confidence					.																																																																											.
Query Sequence		K	G	D	.	S	L	A	S	E	V	I	E	Y	V	G	R	H	L	G	K	T	I	A	I	A	I	N	L	F	N	P	Q	K	I	V	I	A	G	E	I	T	E	A	D	K	V	L	L	P	A	I	E	S	C	I	N	T	Q	A	L	K	A	F	R	T	N	L	P	V	V	R	S	E	L	D	H	R	S	.	A
Query Conservation					.																																																																											.
Alig confidence					.																												.																												.	.	.	.	.															.
Template Conservation																																	.																												.	.	.	.	.
Template Sequence		P	G	N	R	E	A	A	I	A	A	F	E	E	L	G	E	X	A	G	D	A	L	A	S	A	I	T	L	I	D	G	.	L	I	V	I	G	G	G	L	S	G	A	S	K	Y	I	L	P	V	L	L	K	E	X	N	A	Q	T	.	.	.	.	.	G	X	X	Q	K	E	V	Y	D	L	D	E	E	K	S	F
Template Known Secondary structure			S																													S	.						S	G	G	G	G	G																T	.	.	.	.	.	T									T	T	S
Template Predicted Secondary structure																																	.																												.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.						.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	F	A	L	V	K	R	A	M	L	N	G	I	L	L	Q	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	F	A	R	G	E	A	V	E	V	L	V	P	G	T	N	R	K	V
Template Known Secondary structure							T	T							T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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