 |
Job Description | P0AF20 | Confidence | 98.56% | Date | Thu Jan 5 11:24:56 GMT 2012 |
Rank | 62 | Aligned Residues | 104 |
% Identity | 12% | Template | c3flcX_ |
PDB info |
PDB header:transferase | Chain: X: PDB Molecule:glycerol kinase; |
PDBTitle: crystal structure of the his-tagged h232r mutant of glycerol kinase2 from enterococcus casseliflavus with glycerol
|
Resolution | 1.85 Å |
|
 |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | N | F | H | A | I | G | V | R | L | G | R | H | D | A | T | I | T | L | F | D | L | S | S | K | V | L | A | E | E | H | Y | P | L | P | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | T | Q | Q | T | L | E | H | A | L | L | N | A | I | A | Q | F | I | D | S | Y | Q | R | K | L | R | E | L | I | A | I | S | V | I | L |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |
Template Sequence |   |
E | K | N | Y | V | M | A | I | D | Q | G | T | T | S | S | R | A | I | I | F | D | R | N | G | K | K | I | G | S | S | Q | K | E | F | P | Q | Y | F | P | K | S | G | W | V | E | H | N | A | N | E | I | W | N | S | V | Q | S | V | I | A | G | A | F | I | E | S | G | I | R | P | E | A | I | A | G | I | G | I | T | N |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |
|
|
| B |
| S | S | T | T |
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| G | G | G |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
155 | . | |
|
|
|
. | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | |
|
. | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
| . | . | . | . |
|  |  |
|
|
|  |  |  |  |  |
|
|
|
| . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | . |
. |
. |
. |
L | V | D | P | D | S | G | K | I | H | Y | M | P | H | I | . |
. |
Q | V | E | N | W | G | L | V | E | A | L | E | E | R | F | K |
Query Conservation |   |
|
| . | . | . | . |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   | . | . |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
Q | R | E | T | T | V | V | W | D | K | T | T | G | Q | P | I | A | N | A | I | V | W | Q | S | R | Q | S | S | P | I | A | D | Q | L | K | V | D | G | H |
Template Known Secondary structure |   |
| S | S |
|  |  |  |  |  | T | T | T |
|
| B | S | S |
|  |  |
| T | T |
|
| T | T |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|