Job Description P0AF20 Confidence 95.63% Date Thu Jan 5 11:24:56 GMT 2012 Rank 256 Aligned Residues 293 % Identity 11% Template c3dwlB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:actin-related protein 3; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit Resolution 3.78 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																											.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																										.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	F	H	A	I	G	V	R	L	G	R	H	D	A	T	I	T	L	F	D	L	S	S	.	K	V	L	A	E	E	H	Y	P	L	P	E	R	T	Q	Q	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	A	L	L	N	A	I	A	Q	F
Query Conservation																										.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	N	V	P	I	I	M	D	N	G	T	G	Y	S	K	L	G	Y	A	G	N	D	A	P	S	Y	V	F	P	T	V	I	A	T	R	T	E	D	L	D	F	F	I	G	N	D	A	L	K	K	A	S	A	G	Y	S	L	D	Y	P	I	R	H	G	Q	I	E	N	W	D	H	M	E	R	F	W	Q	Q	S
Template Known Secondary structure													S	S							T	T	S	S	S		S													S	S					T						T										S			T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.
Predicted Secondary structure																																																							.																									.
Query SS confidence																																																							.																									.
Query Sequence		I	D	S	Y	Q	R	K	L	R	E	L	I	A	I	S	V	I	L	P	G	L	V	D	P	D	S	G	K	I	H	Y	M	P	H	I	Q	V	E	N	W	G	L	V	E	A	L	E	E	R	F	K	V	T	.	C	F	V	G	H	D	I	R	S	L	A	L	A	E	H	Y	F	G	A	S	Q	D	C	E	.	D
Query Conservation																																																							.																									.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.														.																									.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	K	Y	L	R	C	E	P	E	D	H	Y	F	L	L	T	E	P	P	L	N	P	P	E	N	R	E	.	.	.	.	.	.	.	.	.	.	.	.	N	T	A	E	I	M	F	E	S	F	N	C	A	G	L	Y	I	A	V	Q	A	V	L	A	L	A	A	S	W	T	S	S	K	V	T	D	R	S	L	T
Template Known Secondary structure				T	T	S				G	G	G									T	T								.	.	.	.	.	.	.	.	.	.	.	.									T	T			S														G	G	G	G	S	T	T	T		S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140													.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		215	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		S	I	L	V	R	V	H	R	G	.	T	G	A	G	I	I	S	N	G	R	I	F	I	G	R	N	G	N	V	G	E	I	G	H	I	Q	V	E	P	L	G	E	R	C	H	C	G	N	F	G	C	L	E	T	I	A	A	N	A	A	I	E	Q	R	V	L	N	L	L	K	Q	G	Y	Q	S	R	V	P	L	D
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		G	T	V	V	D	S	G	D	G	V	T	H	I	I	P	V	A	E	G	Y	V	I	G	S	S	I	K	T	M	P	L	A	G	R	D	V	T	Y	F	V	Q	S	L	L	R	L	K	T	A	E	R	I	K	E	E	C	C	Y	V	C	P	D	I	V	K	E	F	S	R	F	D	R	L	K	Y	A	S	I	D	V
Template Known Secondary structure								S	S	S									T	T				G	G	G					S													T	T																	S									T	T				B				B
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.				330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		D	C	T	I	K	T	I	C	K	A	A	N	K	G	D	S	L	A	S	E	V	I	E	Y	V	G	R	H	L	G	K	T	I	A	I	A	.	.	.	I	N	L	F	N	P	Q	K	I	V	I	A	G	E	I	T	E	A	D	K	V	L	L	P	A	I	E	S	C	I	N	T	Q	A	L	K	A	F	R	T	N
Query Conservation																																						.	.	.
Alig confidence																																						.	.	.																			.															.
Template Conservation																																																											.															.
Template Sequence		G	F	E	R	F	L	A	P	E	I	F	F	N	P	E	I	A	S	S	D	F	L	T	P	L	P	E	L	V	D	N	V	V	Q	S	S	P	I	D	V	R	K	G	L	Y	K	N	I	V	L	S	G	G	S	T	L	F	.	K	N	F	G	N	R	L	Q	R	D	L	K	R	I	.	V	D	E	R	G	V	D
Template Known Secondary structure			T					S	G	G	G	G	T		G	G	G	T		S	S			S												T	S																S	G	G	G		S	.	T	T	T	T											.		T	T
Template Predicted Secondary structure																																																											.															.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360
		371	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		L	P	V	V	R	S	E	L	D	H	R	S	A	I	.	G	A	F	A	L	V
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		V	N	V	I	S	H	K	R	Q	R	N	A	V	W	F	G	G	S	L	L	A
Template Known Secondary structure								T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions