Job Description P0AF20 Confidence 99.57% Date Thu Jan 5 11:24:56 GMT 2012 Rank 47 Aligned Residues 255 % Identity 11% Template c1zbsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pg1100; PDBTitle: crystal structure of the putative n-acetylglucosamine kinase (pg1100)2 from porphyromonas gingivalis, northeast structural genomics target3 pgr18 Resolution 2.30 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		A	I	G	V	R	L	G	R	H	D	A	T	I	T	L	F	D	L	S	S	K	V	L	A	E	E	H	Y	P	L	P	E	R	.	.	T	Q	Q	T	L	E	H	A	L	L	N	A	I	A	Q	F	I	D	S	Y	Q	R	K	L	R	E	L	I	A	I	S	V	I	L	P	G	L	V	D	P	D	S	G	K	I
Query Conservation																																			.	.
Alig confidence																																			.	.																						.	.	.																			.	.	.
Template Conservation																																																										.	.	.																			.	.	.
Template Sequence		I	L	I	G	D	S	G	S	T	K	T	D	W	C	I	A	K	E	G	K	S	L	G	R	F	Q	T	S	G	I	N	P	F	Q	Q	D	R	N	E	I	D	T	A	L	R	S	E	V	L	P	A	I	G	Q	K	A	.	.	.	S	S	I	R	A	V	Y	F	Y	G	A	G	C	T	P	A	K	A	.	.	.
Template Known Secondary structure									S	S									T	T													T	T	T	S										T	T	T	T					T	T	S	T	.	.	.	T	T									T	T			T	T	T		.	.	.
Template Predicted Secondary structure																																																										.	.	.																			.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																								.	.																																																		.	.	.	.	.	.	.
Query SS confidence																								.	.																																																		.	.	.	.	.	.	.
Query Sequence		H	Y	M	P	H	I	Q	V	E	N	W	G	L	V	E	A	L	E	E	R	F	K	.	.	V	T	C	F	V	G	H	D	I	R	S	L	A	L	A	E	H	Y	F	G	A	S	Q	D	C	E	D	S	I	L	V	R	V	H	R	G	T	G	A	G	I	I	S	N	G	R	I	F	I	.	.	.	.	.	.	.
Query Conservation																								.	.																																																		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.													.	.																.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	P	X	L	N	E	A	L	D	S	X	L	P	H	C	D	R	I	E	V	A	G	D	X	L	G	A	A	R	A	.	.	.	.	.	.	L	C	G	D	S	E	G	I	A	C	I	L	G	T	G	S	N	S	C	L	F	D	G	R	E	I	K	A	N	V	S	P	L	G	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.											S	T	T		S															.	.	.	.	.	.		T	T	T	S								S	S	S								S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
												76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
				237	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure		.	.												.
Query SS confidence		.	.												.
Query Sequence		.	.	G	R	N	G	N	V	G	E	I	G	H	.	I	Q	V	E	P	L	G	E	R	C	H	C	G	N	F	G	C	L	E	T	I	A	A	N	A	A	I	E	Q	R	V	L	N	L	L	K	Q	G	Y	Q	S	R	V	P	L	D	D	C	T	I	K	T	I	C	K	A	A	N	K	G	D	S	L	A	S	E
Query Conservation		.	.												.
Alig confidence		.	.												.																									.																		.	.													.	.
Template Conservation																																								.																		.	.													.	.
Template Sequence		I	L	G	D	E	G	S	G	A	V	L	G	R	L	F	I	G	S	L	L	K	G	Q	X	P	E	G	L	C	E	A	F	L	Q	E	Y	G	L	.	T	S	A	D	I	I	E	S	V	Y	R	K	P	F	P	N	R	.	.	F	L	A	G	F	S	P	F	I	A	Q	H	.	.	L	D	I	P	A	V	Y	S
Template Known Secondary structure						T	T	S														T	T		S		T	T									T	T		.												S	S					.	.				T	T						T	T	.	.	T	T	S
Template Predicted Secondary structure																																								.																		.	.													.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		V	I	E	Y	V	G	R	H	L	G	K	T	I	A	I	A	I	N	L	F	N	P	Q	K	.	I	V	I	A	G	E	I	T	E	A	D	K	V	L	L	P	A	I	E	S	C	I	N	T	Q	A	L	K	A	F	R	T	N	L
Query Conservation																										.
Alig confidence											.	.														.
Template Conservation											.	.
Template Sequence		L	V	Q	N	S	F	D	D	F	.	.	L	V	R	N	V	L	R	Y	N	R	P	D	L	P	L	H	F	I	G	S	V	A	F	H	Y	R	E	V	L	S	S	V	I	K	K	R	G	L	T	L	G	S	V	L	Q	S	P	X
Template Known Secondary structure											.	.					T	G	G	G			T	T	S						S						T											T	T								S		S
Template Predicted Secondary structure											.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions