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Job DescriptionP0AF20
Confidence99.70%DateThu Jan 5 11:24:56 GMT 2012
Rank42Aligned Residues347
% Identity13%Templatec1ig8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:hexokinase pii; PDBTitle: crystal structure of yeast hexokinase pii with the correct2 amino acid sequence
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QIAEQSQLAPASVTKITRQL. . . IERGLIKEVDQQA. . . STGGRRAISIVTETRNFHAIGVRLGRHDATITLFDLSSK. .
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Template Sequence  NFEKIFTVPTETLQAVTKHFISELEKGLSKKGGNIPMIPGWVMDFPTG. . . . KESGDFLAIDLGGTNLRVVLVKLGGDRT
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   2930.........40.........50.........60.........70...... ...80.........90.........100....
 
   109110........ .120.........130.........140.... .....150.........160.. .......170 ....
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Query Sequence  . VLAEEHYPLP. . . . . ERTQQTLEHALLNAIAQFIDSYQRKL. RELIAISVILPGLVDPDS. . . GKIHYMPH. . . . IQVE
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Template Sequence  FDTTQSKYRLPDAMRTTQNPDELWEFIADSLKAFIDEQFPQGISEPIPLGFTFSFPASQNKINEGILQRWTKGFDIPNIE
Template Known Secondary structure 

TTGGG
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   105....110.........120.........130.........140.........150.........160.........170.........180....
 
   175....180...... ...190. ........200.........210.........220.........230.........240.....
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Query Sequence  NWGLVEALEERF. . . KVTCF. . . VGHDIRSLALAEHYFGASQDCEDSILVRVHRGTGAGIISNGRIFIGRNGNVGEI. . .
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Template Sequence  NHDVVPMLQKQITKRNIPIEVVALINDTTGTLVASYYT. . . . DPETKMGVIFGTGVNGAYYDVCSDIEKLQGKLSDDIPP
Template Known Secondary structure  TSBTT


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TTSSSGGG
GGGTT
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   185....190.........200.........210.........220.. .......230.........240.........250.........260
 
   246...250.........260.... .....270.........280..... ....290...
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Query Sequence  . GHIQVEPLGERCHCGNFGC. . . . . . . . . . . . . . . . . . . . LETIAANAAIEQRVLNLLKQG. . . . . . . . . . . YQSRVPLD
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Template Sequence  SAPMAINCEYGSFDNEHVVLPRTKYDITIDEESPRPGQQTFEKMSSGYYLGEILRLALMDMYKQGFIFKNQDLSKFDKPF
Template Known Secondary structure  T


GGGTTTT
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   261........270.........280.........290.........300.........310.........320.........330.........340
 
   294.....300......... 310.........320.........330....... ..340....
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Query Sequence  DCTIKTICKAANKGDS. . . . . . . . . . . . . . . . . . . . . . . . . . . LASEVIEYVGRHLGKTIAIAINLFNPQK. . IVIAGEI
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Template Sequence  VMDTSYPARIEEDPFENLEDTDDLFQNEFGINTTVQERKLIRRLSELIGARAARLSVCGIAAICQKRGYKTGHIAADGSV
Template Known Secondary structure  SS
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   341........350.........360.........370.........380.........390.........400.........410.........420
 
   345....350.........360.. .......370.........380.........390.
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Query Sequence  TEADKVLLPAIESCINTQ. . ALKAFRTNLPVVRSELDHRSAIGAFALVK
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Template Sequence  YNRYPGFKEKAANALKDIYGWTQTSLDDYPIKIVPAEDGSGAGAAVIAA
Template Known Secondary structure  STTT



SGGG
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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