Job Description P52137 Confidence 1.51% Date Thu Jan 5 12:05:41 GMT 2012 Rank 24 Aligned Residues 93 % Identity 11% Template c3gd8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:aquaporin-4; PDBTitle: crystal structure of human aquaporin 4 at 1.8 and its mechanism of2 conductance Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		A	L	F	A	N	D	G	A	A	L	I	L	T	P	I	V	I	A	M	L	I	A	L	G	F	S	Q	G	T	T	L	A	F	V	M	A	A	G	F	I	A	D	T	A	S	L	P	L	I	V	S	.	.	.	N	L	V	N	I	V	S	A	D	F	F	G	L	S	F	A	Q	Y	A	S	V	M	I	S	V	D
Query Conservation																																																					.	.	.
Alig confidence																																																					.	.	.
Template Conservation
Template Sequence		G	L	L	V	E	L	I	I	T	F	Q	L	V	F	T	I	F	A	S	C	D	S	K	R	T	D	V	T	G	S	I	A	L	A	I	G	F	S	V	A	I	G	H	L	F	A	I	N	Y	T	G	A	S	M	N	P	A	R	S	F	G	P	A	V	I	M	G	N	W	E	N	H	W	I	Y	W	V	G	P	I
Template Known Secondary structure																					T		T	T		S				S																																						T			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	I	A	A	T	L	I	M	L	Y	L	F	F	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	A	V	L	A	G	G	L	Y	E	Y	V	F	C	P
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions