Job Description P15032 Confidence 8.32% Date Thu Jan 5 11:34:17 GMT 2012 Rank 52 Aligned Residues 89 % Identity 15% Template c2oevA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:programmed cell death 6-interacting protein; PDBTitle: crystal structure of alix/aip1 Resolution 3.30 Å

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		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	G	F	V	H	D	L	T	S	L	A	R	D	V	A	T	G	V	L	A	R	S	M	D	L	D	I	Y	N	L	H	P	A	H	A	K	R	I	E	E	I	I	A	E	N	K	P	P	F	S	V	F	R	D	K	F	I	T	M	P	G	G	L	D	Y	S	R	A	I	V	V	A	S	V	K	E	A	P	I
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.																																																			.
Template Conservation																						.	.	.	.	.	.	.	.	.																																																			.
Template Sequence		G	G	S	V	K	L	A	L	A	S	L	G	Y	E	K	S	C	V	L	F	.	.	.	.	.	.	.	.	.	N	C	A	A	L	A	S	Q	I	A	A	E	Q	N	L	D	N	D	E	G	L	K	I	A	A	K	H	Y	Q	F	A	S	G	A	F	L	H	I	K	E	T	V	L	S	A	L	S	R	E	P	.
Template Known Secondary structure		S	S		S					S												.	.	.	.	.	.	.	.	.													S		S	S	S																							T	T					S	S	S			.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																																																			.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.										.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	E	V	I	P	A	H	V	T	E	Y	L	N	K	V	L	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	D	I	S	P	D	T	V	G	T	L	S	L	I	M	L	A	Q
Template Known Secondary structure			S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions