Job Description P15032 Confidence 97.64% Date Thu Jan 5 11:34:17 GMT 2012 Rank 3 Aligned Residues 131 % Identity 21% Template c1w36E_ PDB info PDB header:recombination Chain: E: PDB Molecule:exodeoxyribonuclease v beta chain; PDBTitle: recbcd:dna complex Resolution 3.1 Å

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		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		K	T	L	D	L	G	T	A	F	H	C	R	V	L	E	P	E	E	F	S	N	R	F	I	V	A	P	E	F	N	R	R	T	N	A	G	K	E	E	E	K	A	F	L	M	E	C	A	S	T	G	K	T	V	I	T	A	E	E	G	R	K	I	E	L	M	Y	Q	S	V	M	A	L	P	L	G	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																										.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		R	G	A	S	P	G	T	F	L	H	S	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	L	D	F	T	Q	P	V	D	P	N	W	V	R	E	K	L	E	.	.	L	G	G	F	E	S	Q	W	E	P	V	L	T	E	W	I	T	A	V	L	Q	A	P	L	N	E	T	G	V
Template Known Secondary structure			S											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S			T	T	S													.	.		T	T			G	G	G													S	S		S	S	S	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		947	.	.	950	.	.	.	.	.	.	.	.	.																		960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.			.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.
				719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.																													.	.	.	.	.	.	.	.	750	.	.	.	.	.			.	.	.	.	760	.	.	.	.
Predicted Secondary structure		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.										.	.
Query SS confidence		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.										.	.
Query Sequence		.	.	Q	W	L	V	E	S	A	G	H	A	E	S	S	I	Y	W	E	D	P	E	T	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	R	C	R	P	D	K	I	I	P	E	F	H	.	.	W	I	M	D	V	K	T	T	A	.	.
Query Conservation		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.										.	.
Alig confidence		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.										.	.
Template Conservation
Template Sequence		S	L	S	Q	L	S	A	R	N	K	Q	V	E	M	E	F	Y	L	P	I	S	E	P	L	I	A	S	Q	L	D	T	L	I	R	Q	F	D	P	L	S	A	G	C	P	P	L	E	F	M	Q	V	R	G	M	L	K	G	F	I	D	L	V	F	R	H	E	G	R	Y	Y	L	L	D	Y	K	S	N	W	L	G
Template Known Secondary structure			G	G	G			G	G	G													S																S	S	T	T	S						S																	S	S	S
Template Predicted Secondary structure
Template SS confidence
		1008	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.
								765	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	D	I	Q	R	F	K	T	A	Y	Y	D	Y	R	Y	H	V	Q	D	A	F	Y	S	D	G	Y	E	A	Q
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	S	S	A	Y	T	Q	Q	A	M	A	A	A	M	Q	A	H	R	Y	D	L	Q	Y	Q	L	Y	T	L	A	L	H	R	Y
Template Known Secondary structure		S	S	G	G	G	S	B											T	T	T
Template Predicted Secondary structure
Template SS confidence
		1088	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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