Return to main results Retrieve Phyre Job Id

Job DescriptionP39394
Confidence46.19%DateThu Jan 5 12:00:29 GMT 2012
Rank4Aligned Residues59
% Identity20%Templated2j0na1
SCOP infoIpaD-like IpaD-like IpaD-like
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.........70.........80.........90..... ....100.........110.
Predicted Secondary structure 














.....



Query SS confidence 


















































. . . . .















Query Sequence  QWLEAAGFATGTAVDVKVMEGCIVLTAQPPAAEESELMQSLRQVCKLSARK. . . . . QKQVQAFIGVIAGKQK
Query Conservation   






  
  
 
 
  
 



  

  
  

   
    
   

.....
 
 
  
       
Alig confidence 






...















.....



















.....















Template Conservation   
   
 ...     
    
   
 ..... 
   
  
  
           
  
 



 
 


 
 
Template Sequence  KWLTELG. . . GTIGKVSQKNGGYVVS. . . . . INMTPIDNMLKSLDNLGGNGEVVLDNAKYQAWNAGFSAEDE
Template Known Secondary structure  TT...TTSTT.....

S

SS
Template Predicted Secondary structure 

...








.....













Template SS confidence 







































































   225....230. ........240....... ..250.........260.........270.........280........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions