 |
Job Description | P45748 | Confidence | 7.86% | Date | Thu Jan 5 12:03:29 GMT 2012 |
Rank | 52 | Aligned Residues | 61 |
% Identity | 26% | Template | d1m0sa1 |
SCOP info | NagB/RpiA/CoA transferase-like
| NagB/RpiA/CoA transferase-like
| D-ribose-5-phosphate isomerase (RpiA), catalytic domain
|
Resolution | 1.90 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | |
. | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | N | N | L | Q | R | D | A | I | A | A | . |
A | I | D | V | L | N | E | E | R | V | I | A | Y | P | T | E | A | V | F | G | V | G | C | D | P | D | S | E | T | A | V | M | R | L | L | E | L | K | Q | R | P | V | D | K | G | L | I | L | I | A | A | N | Y | E | Q | L | K | P | Y | I | D |
Query Conservation |   |
|   |   |
|   |   |   |   |   |
|   |   | . |
|   |   |   |
|   |   |
|   |
|
|   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|
|   |
|   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |
|   |   |
|   |   |
Template Sequence |   |
M | N | Q | L | E | M | K | K | L | A | A | Q | A | A | L | Q | Y | V | K | A | D | R | I | V | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | G | S | G | S | T | V | N | C | F | I | E | A | L | G | T | I | K | D | K | I | Q | G | A | V | A | A | S | K | E | S | E | E | L | L | R | K |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|
| T | T | S |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  | T | T | G | G | G | S |
|  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|