Job Description P00914 Confidence 100.00% Date Thu Jan 5 10:57:10 GMT 2012 Rank 17 Aligned Residues 233 % Identity 45% Template d2j07a1 SCOP info Cryptochrome/photolyase FAD-binding domain Cryptochrome/photolyase FAD-binding domain Cryptochrome/photolyase FAD-binding domain Resolution 1.95

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		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	F	P	V	E	E	K	A	A	I	A	Q	L	R	Q	F	C	Q	N	G	A	G	E	Y	E	Q	Q	R	D	F	P	A	V	E	G	T	S	R	L	S	A	S	L	A	T	G	G	L	S	P	R	Q	C	L	H	R	L	L	A	E	Q	P	Q	A	L	D	G	G	A	G	S	V	W	L	N	E	L	I	W
Query Conservation
Alig confidence																																																															.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		P	L	P	E	P	G	E	E	A	A	L	A	G	L	R	A	F	L	E	A	K	L	P	R	Y	A	E	E	R	D	R	L	D	G	E	G	G	S	R	L	S	P	Y	F	A	L	G	V	L	S	P	R	L	A	A	W	E	A	E	R	R	.	.	.	.	.	G	G	E	G	A	R	K	W	V	A	E	L	L	W
Template Known Secondary structure							S															T	G	G	G					T	T		T	T		T	T	S									T	T	S	S													.	.	.	.	.		S
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.						.	.	.	.	.	.	240	.	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	F	Y	R	H	L	I	T	Y	H	P	S	L	C	K	H	R	P	F	I	A	W	T	D	R	V	Q	W	Q	S	N	P	A	H	L	Q	A	W	Q	E	G	K	T	G	Y	P	I	V	D	A	A	M	R	Q	L	N	S	T	G	W	M	H	N	R	L	R	M	I	T	A	S	F	L	V	K	D	L	L	I
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		R	D	F	S	Y	H	L	L	Y	H	F	P	W	M	.	A	E	R	P	L	D	P	R	F	Q	A	F	P	W	Q	E	D	E	A	L	F	Q	A	W	Y	E	G	K	T	G	V	P	L	V	D	A	A	M	R	E	L	H	A	T	G	F	L	S	N	R	A	R	M	N	A	A	Q	F	A	V	K	H	L	L	L
Template Known Secondary structure													G	G	G	.	G	T	S		S	S	G	G	G	T	T															T	T		S	S															S																	T	S
Template Predicted Secondary structure																.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	W	R	E	G	E	R	Y	F	M	S	Q	L	I	D	G	D	L	A	A	N	N	G	G	W	Q	W	A	A	S	T	G	T	D	A	A	P	Y	F	R	I	F	N	P	T	T	Q	G	E	K	F	D	H	E	G	E	F	I	R	Q	W	L	P	E	L	R	D	V	P	G	K	V	V	H	E	P	W	K	W	A
Query Conservation
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	W	K	R	C	E	E	A	F	R	H	L	L	L	D	G	D	R	A	V	N	L	Q	G	W	Q	W	A	G	G	L	G	V	D	A	A	P	Y	F	R	V	F	N	P	V	L	Q	G	E	R	H	D	P	E	G	R	W	L	K	R	W	A	P	E	Y	P	S	Y	A	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	T														T	T	S	S	G	G	G			T	T													S	T	T	S								T	T		S	S	S	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	A	G	V	T	L	D	Y	P	Q	P	I	V	E	H	K	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	P	K	D	P	V	V	D	L	E	E
Template Known Secondary structure		.	.	.	.	.	.	.	.		S	S		S	S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										396	.	.	.	400	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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