Job Description P00914 Confidence 100.00% Date Thu Jan 5 10:57:10 GMT 2012 Rank 16 Aligned Residues 268 % Identity 34% Template d1np7a1 SCOP info Cryptochrome/photolyase FAD-binding domain Cryptochrome/photolyase FAD-binding domain Cryptochrome/photolyase FAD-binding domain Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																									.	.														.
Query SS confidence																									.	.														.
Query Sequence		Q	S	F	D	T	A	H	F	P	V	E	E	K	A	A	I	A	Q	L	R	Q	F	C	.	.	Q	N	G	A	G	E	Y	E	Q	Q	R	D	F	.	P	A	V	E	G	T	S	R	L	S	A	S	L	A	T	G	G	L	S	P	R	Q	C	L	H	R	L	L	A	E	Q	P	Q	A	L	D	G	G	A	G	S
Query Conservation																									.	.														.
Alig confidence																									.	.														.
Template Conservation
Template Sequence		D	H	R	S	V	L	A	F	Q	G	G	E	T	A	G	L	A	R	L	Q	D	Y	F	W	H	G	D	R	L	K	D	Y	K	E	T	R	N	G	M	V	G	A	D	Y	S	S	K	F	S	P	W	L	A	L	G	C	L	S	P	R	F	I	Y	Q	E	V	K	R	Y	E	Q	E	R	V	S	N	D	S	T	H
Template Known Secondary structure			T	T	S	S						S													T	T	S			G	G	G					T	T			S	S	S	T	T	S									T	T	S	S																T			S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		V	W	L	N	E	L	I	W	R	E	F	Y	R	H	L	I	T	Y	H	P	S	L	C	K	H	R	P	F	I	A	W	T	D	R	V	Q	W	Q	S	N	P	A	H	L	Q	A	W	Q	E	G	K	T	G	Y	P	I	V	D	A	A	M	R	Q	L	N	S	T	G	W	M	H	N	R	L	R	M	I	T	A	S
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		W	L	I	F	E	L	L	W	R	D	F	F	R	F	V	A	Q	K	Y	G	N	K	L	F	N	R	G	G	L	L	N	.	K	N	F	P	W	Q	E	D	Q	V	R	F	E	L	W	R	S	G	Q	T	G	Y	P	L	V	D	A	N	M	R	E	L	N	L	T	G	F	M	S	N	R	G	R	Q	N	V	A	S
Template Known Secondary structure																					G	G	G	G	G	S	T	T	T	T	T	T	.						B											T	T		S	S															S
Template Predicted Secondary structure																																	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	V	K	D	L	L	I	D	W	R	E	G	E	R	Y	F	M	S	Q	L	I	D	G	D	L	A	A	N	N	G	G	W	Q	W	A	A	S	T	G	T	D	A	A	P	Y	F	R	I	F	N	P	T	T	Q	G	E	K	F	D	H	E	G	E	F	I	R	Q	W	L	P	E	L	R	D	V	P	G	K	V
Query Conservation
Alig confidence																																																.
Template Conservation																																																.
Template Sequence		F	L	C	K	N	L	G	I	D	W	R	W	G	A	E	W	F	E	S	C	L	I	D	Y	D	V	C	S	N	W	G	N	W	N	Y	T	A	G	I	G	N	D	A	R	D	F	.	R	Y	F	N	I	P	K	Q	S	Q	Q	Y	D	P	Q	G	T	Y	L	R	H	W	L	P	E	L	K	N	L	P	G	D	K
Template Known Secondary structure						T	T		B														T	T															T	S	S			T	T	S		.													S	T	T	S								G	G	G	T	T			S	G	G
Template Predicted Secondary structure																																																.
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		431	.	.	.	.	.	.	.							.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		V	H	E	P	W	K	W	A	.	.	.	.	.	.	Q	K	A	G	V	T	L	D	Y	P	Q	P	I	V	E	H	K	E	A	R	V	Q	T	L	A
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.
Template Conservation
Template Sequence		I	H	Q	P	W	L	L	S	A	T	E	Q	K	Q	W	G	V	Q	L	G	V	D	Y	P	R	P	C	V	N	F	H	Q	S	V	E	A	R	R	K
Template Known Secondary structure		G	G		G	G	G									T	T			B	T	T	T	B				S	S											T
Template Predicted Secondary structure
Template SS confidence
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions