Job Description P00914 Confidence 29.26% Date Thu Jan 5 10:57:10 GMT 2012 Rank 30 Aligned Residues 70 % Identity 19% Template c2l06A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:phycobilisome lcm core-membrane linker polypeptide; PDBTitle: solution nmr structure of the pbs linker polypeptide domain (fragment2 254-400) of phycobilisome linker protein apce from synechocystis sp.3 pcc 6803. northeast structural genomics consortium target sgr209c Resolution UNK

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		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		L	A	T	G	G	L	S	P	R	Q	C	L	H	R	L	L	A	E	Q	P	Q	A	L	D	G	G	A	G	S	V	W	L	N	E	L	I	W	R	E	F	Y	R	H	L	I	T	Y	H	P	S	L	C	K	H	R	P	F	I	A	W	T	D	R	V	Q	W	Q	S	N	P	A	H	L	Q	A	W	Q	E	.	.
Query Conservation																																																																																.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	N	G	D	I	S	M	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	R	R	L	A	K	S	P	L	Y	R	K	Q	F	F	E	P	F	I	N	S	R	A	L	E	L	A	F	R	H	I	L	G	R	G	P	S	S	R	E	E	V	Q	K	Y	F	S	I	V
Template Known Secondary structure					T		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	S							T	T	T	T	S														T	S	S				S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.																					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		320	.	.	.	.	.		.	.	.	.	330	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		G	K	T	G	Y	P	.	I	V	D	A	A	M
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		S	S	G	G	L	P	A	L	V	D	A	L	V
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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