Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADF8
Confidence31.18%DateThu Jan 5 11:20:55 GMT 2012
Rank65Aligned Residues85
% Identity15%Templated1be4a_
SCOP infoFerredoxin-like Nucleoside diphosphate kinase, NDK Nucleoside diphosphate kinase, NDK
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.... .....30.........40...... ...50.....
Predicted Secondary structure 







.....






........................

Query SS confidence 



















. . . . .





















. . . . . . . . . . . . . . . . . . . . . . . .








Query Sequence  THDNVILELTVRNHPGVMTH. . . . . VCGLFARRAFNVEGILCLPIQD. . . . . . . . . . . . . . . . . . . . . . . . SDKSHIWLL
Query Conservation        


 
 
 



 
.....
  

 





 

 
  

 ........................   





Alig confidence 









...






.....





















........................



.



Template Conservation 
  
 

 

...




     
 

  
   

 
   
   

 
 
  

           

  
 


 .
 
 
Template Sequence  ANSERTFIAI. . . KPDGVQRGLMGEIIKRFEQKGFRLVAMKFMRASEDLLKEHYIDLKDRPFFAGLVKYMHSGPV. VAMV
Template Known Secondary structure 
TT
...
TT
T


GGGSSSTTGGGSS.
Template Predicted Secondary structure 



...


















.
Template SS confidence 















































































   2.......10. ........20.........30.........40.........50.........60.........70... ....
 
   56...60......... 70.........80.........90.....
Predicted Secondary structure 

...................








Query SS confidence 













. . . . . . . . . . . . . . . . . . .

























Query Sequence  VNDDQRLEQMISQI. . . . . . . . . . . . . . . . . . . DKLEDVVKVQRNQSDPTMFNKIAVFF
Query Conservation 
     
 

 


................... 




  
  
     
 


 
  
Alig confidence 













...................








..














Template Conservation 
 
 


   
 
 




  
 
 



  
     
 

 ..

    
 


  

Template Sequence  WEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHG. . SDSVESAEKEIALWF
Template Known Secondary structure  STT

SSGGG

TTS

BTTB

..
SS
Template Predicted Secondary structure 

















..



Template SS confidence 


























































   78.80.........90.........100.........110......... 120.........130....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions