Job Description P0ADF8 Confidence 74.44% Date Thu Jan 5 11:20:55 GMT 2012 Rank 54 Aligned Residues 81 % Identity 20% Template c2az1B_ PDB info PDB header:transferase Chain: B: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: structure of a halophilic nucleoside diphosphate kinase2 from halobacterium salinarum Resolution 2.35 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.						.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																										.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	H	D	N	V	I	L	E	L	T	V	R	N	H	P	G	V	M	T	.	.	.	.	.	H	V	C	G	L	F	A	R	R	A	F	N	V	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	C	L	P	I	Q	D	S	D	K	S	H	I	W	L
Query Conservation																					.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.							.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.
Template Conservation												.	.	.																																																										.	.	.	.	.	.	.
Template Sequence		D	H	D	E	R	T	F	V	M	V	.	.	.	K	P	D	G	V	Q	R	G	L	I	G	D	I	V	T	R	L	E	T	K	G	L	K	M	V	G	G	K	F	M	R	I	D	E	E	L	A	H	E	H	Y	A	E	F	F	D	G	L	V	S	F	I	T	S	G	P	V	.	.	.	.	.	.	.	F	A	M
Template Known Secondary structure			T	T								.	.	.							T	T												T	T																				T												T	S	S			.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.																																																										.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.								70	.	.
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.																				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	N	D	D	Q	R	L	E	Q	M	I	S	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	L	E	D	V	V	K	V	Q	R	N	Q	S	D	P	T	M	F	N	K	I	A	V	F	F
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	W	E	G	A	D	A	T	R	Q	V	R	Q	L	M	G	A	T	D	A	Q	D	A	A	P	G	T	I	R	G	D	Y	G	N	D	L	G	H	N	L	I	H	G	S	D	H	E	D	E	G	A	N	E	R	E	I	A	L	F	F
Template Known Secondary structure					S	T	T												S	S	T	T	T	S		T	T	S									S	S	S		S						S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions