 |
Job Description | P77694 | Confidence | 11.31% | Date | Thu Jan 5 12:31:44 GMT 2012 |
Rank | 26 | Aligned Residues | 24 |
% Identity | 21% | Template | c3csyJ_ |
PDB info |
PDB header:immune system/viral protein | Chain: J: PDB Molecule:envelope glycoprotein gp2; |
PDBTitle: crystal structure of the trimeric prefusion ebola virus glycoprotein2 in complex with a neutralizing antibody from a human survivor
|
Resolution | 3.40 Å |
|
  |   |
236 | . | . | . | 240 | . | . | . | . | . | |
. | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | P | T | L | G | E | G | N | A | D | . |
C | R | T | Q | T | I | G | S | R | S | G | L | S | C |
Query Conservation |   |
  |
|
|
|   |   |
|
|   |   | . |
|   |   |   |   |
|   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |
|
|
|
|
|   |
|
|
|   |
|
|
|   |
|
|
|
Template Sequence |   |
I | P | Y | F | G | P | A | A | E | G | I | Y | T | E | G | L | M | H | N | Q | D | G | L | I | C |
Template Known Secondary structure |   |
S | S | S | S | S |
|
| T | T | S | S |  |  |  |  |  |  |
|
|
| T | T |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
532 | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|