Job Description P77694 Confidence 30.94% Date Thu Jan 5 12:31:44 GMT 2012 Rank 3 Aligned Residues 176 % Identity 12% Template c2wdaA_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative secreted lyase; PDBTitle: the x-ray structure of the streptomyces coelicolor a32 chondroitin ac lyase in complex with chondroitin sulphate Resolution 2.30 Å

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		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		S	G	L	S	C	K	M	V	N	Y	T	L	Q	T	N	G	L	S	N	T	S	I	H	I	F	P	A	I	A	N	S	S	L	A	S	A	V	G	A	Y	D	M	Q	F	S	L	N	G	S	S	W	K	P	V	S	N	T	A	Y	Y	Y	T	F	N	E	M	K	S	A	D	.	S	I	Y	V	F	F	S	S	N
Query Conservation																																																																								.
Alig confidence							.	.	.	.	.	.																																.	.	.	.																.	.	.	.						.
Template Conservation							.	.	.	.	.	.																																.	.	.	.																.	.	.	.
Template Sequence		D	A	V	V	C	.	.	.	.	.	.	L	G	A	G	I	T	C	A	D	G	V	P	V	E	T	V	V	D	N	R	N	L	G	E	G	G	T	Q	A	L	V	.	.	.	.	R	G	R	H	W	A	H	L	E	G	H	G	G	W	I	.	.	.	.	V	P	G	G	A	L	R	T	L	R	E	D	R	T	G
Template Known Secondary structure		S					.	.	.	.	.	.									S	S	S													T	T							.	.	.	.			T	T					T	T	T					.	.	.	.			T	T	T
Template Predicted Secondary structure							.	.	.	.	.	.																																.	.	.	.																.	.	.	.
Template SS confidence
		532	.	.	.	.							.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.					.	.	570	.	.	.	.	.	.	.	.	.	580	.	.					.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.												380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.					.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.					.
Query Sequence		F	F	K	Q	M	V	N	L	G	I	S	D	I	N	T	K	D	L	F	N	F	R	F	Q	N	T	T	S	P	E	S	G	W	Y	E	F	S	T	S	N	T	L	I	I	K	P	.	.	.	.	.	.	.	.	.	.	.	R	D	F	S	.	I	S	I	I	S	D	E	Y	T	Q	T	P	S	R	E	G	Y	V
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.					.
Alig confidence																																						.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation																																						.	.	.	.	.	.
Template Sequence		A	W	S	D	I	N	T	T	S	T	T	E	R	R	T	R	R	W	Q	T	L	W	L	D	H	G	T	D	P	A	G	A	D	Y	V	Y	.	.	.	.	.	.	T	V	M	P	G	A	S	R	A	A	L	A	R	R	A	A	D	R	H	W	L	T	V	L	A	N	D	D	R	R	Q	A	V	S	V	P	S	L
Template Known Secondary structure			G	G	G	S	B	T	T	B																			S		S	S						.	.	.	.	.	.					T													S	S	S								T	T							G	G	G
Template Predicted Secondary structure																																						.	.	.	.	.	.
Template SS confidence
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.							.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
		402	.							.	.	.	.	.	.	410	.	.	.	.	.	.	.	.							.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.							.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure				.	.	.	.	.	.																.	.	.	.	.	.																										.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.																.	.	.	.	.	.																										.	.	.	.	.	.
Query Sequence		G	S	.	.	.	.	.	.	G	E	S	A	L	D	F	G	Y	I	V	T	T	S	G	.	.	.	.	.	.	K	T	A	A	D	E	V	L	I	K	V	T	G	P	A	Q	V	I	G	G	R	S	Y	C	V	.	.	.	.	.	.	F	S	S	D	D	G	K	A	K	V
Query Conservation				.	.	.	.	.	.																.	.	.	.	.	.																										.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.							.	.	.							.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation																.	.	.
Template Sequence		G	L	T	A	A	N	F	W	Q	A	G	T	A	G	.	.	.	P	L	T	T	T	A	G	A	S	V	L	V	R	R	R	G	R	T	A	T	L	R	V	S	E	P	P	R	T	G	E	A	L	E	I	V	W	D	H	P	V	G	A	V	L	R	A	D	E	T	V	E	I
Template Known Secondary structure		T							S	S	S				T	.	.	.	T				S	S	S									T	T									T	T												S										T	T
Template Predicted Secondary structure																.	.	.
Template SS confidence
		672	.	.	.	.	.	.	.	680	.	.	.	.	.				.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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