Job Description P77694 Confidence 11.81% Date Thu Jan 5 12:31:44 GMT 2012 Rank 25 Aligned Residues 119 % Identity 10% Template c1hn0A_ PDB info PDB header:lyase Chain: A: PDB Molecule:chondroitin abc lyase i; PDBTitle: crystal structure of chondroitin abc lyase i from proteus2 vulgaris at 1.9 angstroms resolution Resolution 1.90 Å

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		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380																	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.							.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		T	K	D	L	F	N	F	R	F	Q	N	T	T	S	P	E	S	G	W	Y	E	F	S	T	S	N	T	L	I	I	K	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	S	I	S	I	I	S	D	E	Y	T	Q	T	P	S	R	E	G	Y	V	G	S	.	.	.	.	.	.	G	E
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		E	G	N	F	S	S	A	W	I	D	H	S	T	R	P	K	D	A	S	Y	E	Y	.	.	.	.	.	.	M	V	F	L	D	A	T	P	E	K	M	G	E	M	A	Q	K	F	R	E	N	N	G	L	Y	Q	V	L	R	K	D	K	D	V	H	I	I	L	D	K	L	S	N	V	T	G	Y	A	F	Y	Q	P
Template Known Secondary structure												G	G	G	S	S	S	S						.	.	.	.	.	.				T	T															T	T		S	S							S	S	S							T	T	T	T							S	S
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		854	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.							.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.							.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		S	A	L	D	F	G	Y	I	V	T	T	S	G	.	.	.	.	.	.	K	T	A	A	D	E	V	L	I	K	V	T	G	P	A	Q	V	I	G	G	R	S	Y	C	V	F	S	S	D	D	G	K	A	K	V	P	F	P	A	T	L	S	F	I	T	R	N	G	A	T	K	T	Y	D	A	G	C	D
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																							.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		A	S	I	E	D	K	W	I	K	K	V	N	K	P	A	I	V	M	T	H	R	Q	K	D	T	L	I	V	S	A	V	T	P	D	L	N	M	T	R	Q	K	.	.	.	.	A	A	T	P	V	T	I	N	V	T	I	N	G	K	W	Q	S	A	D	K	N	S	E	V	K	Y	Q	V	S	G	D	N
Template Known Secondary structure							S	S					S	S	S									S	S									S						S	S	S	.	.	.	.												S	S					S		S										T	T
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		928	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.					.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions