Job Description P0AF06 Confidence 99.91% Date Wed Jan 25 15:20:32 GMT 2012 Rank 9 Aligned Residues 109 % Identity 25% Template c3td4D_ PDB info PDB header:membrane protein,peptide binding protein Chain: D: PDB Molecule:outer membrane protein omp38; PDBTitle: crystal structure of ompa-like domain from acinetobacter baumannii in2 complex with diaminopimelate Resolution 1.79 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230
Predicted Secondary structure																																						.																																									.
Query SS confidence																																						.																																									.
Query Sequence		I	D	S	Q	N	R	P	M	F	R	T	G	S	A	D	V	E	P	Y	M	R	D	I	L	R	A	I	A	P	V	L	N	G	I	P	N	.	R	I	S	L	S	G	H	T	D	D	F	P	Y	A	S	G	E	K	G	Y	S	N	W	E	L	S	A	D	R	A	N	A	S	R	R	E	L	M	V	G	.	G	L
Query Conservation																																						.																																									.
Alig confidence																																						.												.	.	.	.	.																									.
Template Conservation																																																		.	.	.	.	.
Template Sequence		L	N	M	E	L	R	V	F	F	D	T	N	K	S	N	I	K	D	Q	Y	K	P	E	I	A	K	V	A	E	K	L	S	E	Y	P	N	A	T	A	R	I	E	G	H	T	D	N	T	.	.	.	.	.	G	P	R	K	L	N	E	R	L	S	L	A	R	A	N	S	V	K	S	A	L	V	N	E	Y	N	V
Template Known Secondary structure												T	T						G	G	G														S	T	T											S		.	.	.	.	.	S																							T	T
Template Predicted Secondary structure																																																		.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.						.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		D	S	G	K	V	L	R	V	V	G	M	A	A	T	M	R	L	S	D	R	G	P	.	.	D	D	A	V	N	R	R	I	S	L	L	V	L	N	K
Query Conservation																								.	.
Alig confidence						.																		.	.
Template Conservation						.
Template Sequence		D	A	S	R	.	L	S	T	Q	G	F	A	W	D	Q	P	I	A	D	N	K	T	K	E	G	R	A	M	N	R	R	V	F	A	T	I	T	G	S
Template Known Secondary structure			G	G	G	.							T	T	S	S		S	S		T	T	S								S
Template Predicted Secondary structure						.
Template SS confidence
		301	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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