Job Description P0AF06 Confidence 99.89% Date Wed Jan 25 15:20:32 GMT 2012 Rank 13 Aligned Residues 108 % Identity 21% Template c1r1mA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein class 4; PDBTitle: structure of the ompa-like domain of rmpm from neisseria2 meningitidis Resolution 1.90 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		I	D	S	Q	N	R	P	M	F	R	T	G	S	A	D	V	E	P	Y	M	R	D	I	L	R	A	I	A	P	V	L	N	G	I	P	N	.	R	I	S	L	S	G	H	T	D	D	F	P	Y	A	S	G	E	K	G	Y	S	N	W	E	L	S	A	D	R	A	N	A	S	R	R	E	L	M	V	G	G	L	D
Query Conservation																																						.
Alig confidence																																						.												.	.	.	.	.
Template Conservation																																																		.	.	.	.	.
Template Sequence		I	S	L	S	A	K	T	L	F	G	F	D	K	D	S	L	R	A	E	A	Q	D	N	L	K	V	L	A	Q	R	L	S	R	T	N	I	Q	S	V	R	V	E	G	H	T	D	F	M	.	.	.	.	.	G	S	D	K	Y	N	Q	A	L	S	E	R	R	A	Y	V	V	A	N	N	L	V	S	N	G	V	P
Template Known Secondary structure											T	T	S	S	S																		T	T	S													S	S	.	.	.	.	.	S																							T	T
Template Predicted Secondary structure																																																		.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.																					.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																							.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	K	V	L	R	V	V	G	M	A	A	T	M	R	L	S	D	R	G	P	.	.	D	D	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	R	I	S	L	L	V	L	N
Query Conservation																							.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		V	S	R	I	.	S	A	V	G	L	G	E	S	Q	A	Q	M	T	Q	V	C	E	A	E	V	A	K	L	G	A	K	V	S	K	A	K	K	R	E	A	L	I	A	C	I	E	P	D	R	R	V	D	V	K	I	R	S
Template Known Secondary structure		G	G	G		.						T	T	T	T													T			S	S			S	S										T	G	G	G	S
Template Predicted Secondary structure						.
Template SS confidence
		150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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