Job Description P75988 Confidence 12.19% Date Thu Jan 5 12:16:58 GMT 2012 Rank 34 Aligned Residues 83 % Identity 12% Template c1vs3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:trna pseudouridine synthase a; PDBTitle: crystal structure of the trna pseudouridine synthase trua from thermus2 thermophilus hb8 Resolution 2.25 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	R	I	I	T	H	D	D	T	V	L	L	L	R	G	T	R	N	L	L	K	V	S	T	T	K	N	P	A	K	I	K	E	A	A	L	L	H	I	C	G	K	S	T	F	R	E	Y	C	S	T	L	A	G	A	G	V	F	R	W	V	T	D	V	N	H	N	K	R	S	Y	Y	A	I	D	N	T	L	L
Query Conservation
Alig confidence																																										.										.	.	.	.
Template Conservation																																										.										.	.	.	.
Template Sequence		A	Y	R	Y	R	I	L	V	R	P	H	P	S	P	L	L	R	H	R	A	L	W	V	R	R	P	L	D	L	E	A	M	E	E	A	L	S	L	L	L	.	G	R	H	N	F	L	G	F	A	.	.	.	.	K	E	E	T	R	P	G	E	R	E	L	L	E	A	R	L	Q	V	A	E	G	E	A	G	L	E
Template Known Secondary structure										S	S	S			T	T	T	T	T	T	S					S																.						G	G	G		.	.	.	.	S	S			S																	S	S
Template Predicted Secondary structure																																										.										.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		123	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	E	D	V	E	N	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	L	Y	F	R	G	K
Template Known Secondary structure									S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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