Job Description P77536 Confidence 99.95% Date Thu Jan 5 12:30:20 GMT 2012 Rank 2 Aligned Residues 158 % Identity 25% Template d2g40a1 SCOP info NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like YkgG-like Resolution 1.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	Y	L	Y	Q	L	S	E	K	V	T	Q	N	G	G	H	V	Y	F	A	R	T	K	E	D	A	T	R	Y	I	L	Q	V	A	Q	R	K	N	A	R	K	V	V	K	S	K	S	M	V	T	E	E	I	G	V	N	H	V	L	Q	D	A	G	I	Q	V	I	E	T	D	L	G	E	Y	I	L	Q	L	D
Query Conservation
Alig confidence																							.																							.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																							.																							.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Sequence		A	E	I	L	H	Q	F	E	D	R	I	L	D	Y	G	A	A	Y	T	H	V	.	S	A	A	E	L	P	G	A	I	A	K	A	L	G	N	A	R	R	V	I	V	P	.	.	.	.	.	.	.	.	.	A	G	I	P	A	P	W	L	T	V	G	M	D	V	L	R	D	E	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	T							.		T	T	T										T	T								.	.	.	.	.	.	.	.	.	T	T	S		G	G	G			T	T							S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																							.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.										.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		Q	D	P	P	S	H	V	V	V	P	A	I	H	K	D	R	H	Q	I	R	R	V	L	H	E	R	L	G	Y	E	G	P	E	T	P	E	A	M	T	L	F	I	R	Q	K	I	R	E	D	F	L	S	A	E	I	G	I	T	G	C	N	F	A	V	A	E	T	G	S	V	C	L	V	T	N	E	G	N	A	.
Query Conservation																																																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	L	S	H	A	E	L	D	R	A	D	A	V	L	T	G	C	A	V	A	I	S	E	T	G	T	I	I	L	D	H	R	A	D	Q	G	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S											S							S				T	T	T	T								T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																												103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	C	T	T	L	P	K	T	H	I	A	V	M	G	M	E	R	I	A	P	T	F	A	E	V	D	V	L	I	T	M	L	A	R	S	A	V	G	A	R	L	T	G	Y	N	T	W	L	T	G	P	R	E	A	G	H	V	D	G	P	E	E	F	H	L	V	I	V
Query Conservation
Alig confidence																																						.	.	.	.	.	.												.	.	.
Template Conservation																																						.	.	.	.	.	.												.	.	.
Template Sequence		R	A	L	S	L	I	P	D	F	H	I	C	V	V	R	E	D	Q	I	V	Q	T	V	R	E	G	V	E	A	V	A	A	S	V	R	E	.	.	.	.	.	.	G	R	P	L	T	W	L	S	G	G	S	.	.	.	G	V	H	G	P	R	R	L	Q	V	I	V	V
Template Known Secondary structure		G	G	G	G	T	S	S	S								G	G	G			S	S														T	.	.	.	.	.	.	T											.	.	.			S	S		S
Template Predicted Secondary structure																																						.	.	.	.	.	.												.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.							.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions