 |
Job Description | P77536 | Confidence | 96.61% | Date | Thu Jan 5 12:30:20 GMT 2012 |
Rank | 35 | Aligned Residues | 44 |
% Identity | 30% | Template | c2zvsB_ |
PDB info |
PDB header:electron transport | Chain: B: PDB Molecule:uncharacterized ferredoxin-like protein yfhl; |
PDBTitle: crystal structure of the 2[4fe-4s] ferredoxin from escherichia coli
|
Resolution | 1.65 Å |
|
 |
  |   |
311 | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 370 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | C | I | R | C | G | A | C | M | N | T | C | P | A | Y | R | H | I | G | G | H | G | Y | G | S | I | Y | P | G | P | I | G | A | V | I | S | P | L | L | G | G | Y | K | D | F | K | D | L | P | Y | A | C | S | L | C | . |
. |
. |
. |
. |
. |
T | A | C | D | N | V | C | P | V | R |
Query Conservation |   |
  |
|
|
|
|
|   |
|   |   |   |
|
|
|
|
|   |   |
|
|   |   |   |
|   |   |
|   |
|
|
|
|
|
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
| . | . | . | . | . | . |
|
|
|   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |   |
|   |   |   |
|
| . |   |   |
|
|   |   |   |   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |
|
|
|   |   |
Template Sequence |   |
K | C | I | N | C | D | M | C | E | P | E | C | P | . |
N | E | A | I | S | M | G | D | H | I | Y | E | I | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | D | K | C | T | E | C | V | G | H | Y | E | T | P | T | C | Q | K | V | C | P | I | P |
Template Known Secondary structure |   |
T |
|
|
|
|
| S | S | G | G | G |
| T | . | T |
|
|  |  |
|
| S | S | S |
|  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T |
|
| T | T | T | T | T |
| S | S |
|  |  |  |  |  |
| S | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|