Job Description P77536 Confidence 50.45% Date Thu Jan 5 12:30:20 GMT 2012 Rank 74 Aligned Residues 76 % Identity 26% Template c2xrzA_ PDB info PDB header:lyase/dna Chain: A: PDB Molecule:deoxyribodipyrimidine photolyase; PDBTitle: x-ray structure of archaeal class ii cpd photolyase from2 methanosarcina mazei in complex with intact cpd-lesion Resolution 2.20 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		L	D	A	Y	L	Y	Q	L	S	E	K	V	T	Q	N	G	G	H	V	Y	F	A	R	T	K	E	D	A	T	R	Y	I	L	Q	V	A	Q	R	K	N	A	R	K	V	V	K	S	K	S	M	V	T	E	E	I	G	V	N	H	.	V	L	Q	D	A	G	I	Q	V	I	E	T	D	L	G	E	Y	I	L	Q
Query Conservation																																																													.
Alig confidence																										.	.																																		.														.	.	.	.	.	.	.
Template Conservation																										.	.																																																.	.	.	.	.	.	.
Template Sequence		M	L	K	G	L	Q	E	L	E	V	S	L	S	R	K	K	I	P	S	F	F	L	R	G	.	.	D	P	G	E	K	I	S	R	F	V	K	D	Y	N	A	G	T	L	V	T	D	F	S	P	L	R	I	K	N	Q	W	I	E	K	V	I	S	G	I	S	I	P	F	F	E	V	D	.	.	.	.	.	.	.
Template Known Secondary structure																T	T								S	.	.													T	T		S									S													T			S							.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.																																																.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		145	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	Q	D	P	P	S	H	V	V	V	P
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	A	H	N	V	V	P
Template Known Secondary structure		.	.	.	.	.	.		S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								143	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions