Job Description P0AFY8 Confidence 100.00% Date Thu Jan 5 11:27:35 GMT 2012 Rank 1 Aligned Residues 157 % Identity 100% Template c3fmtF_ PDB info PDB header:replication inhibitor/dna Chain: F: PDB Molecule:protein seqa; PDBTitle: crystal structure of seqa bound to dna Resolution 2.98 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	I	E	V	D	D	E	L	Y	S	Y	I	A	S	H	T	K	H	I	G	E	S	A	S	D	I	L	R	R	M	L	K	F	S	A	A	S	Q	P	A	A	P	V	T	K	E	V	R	V	A	S	P	A	I	V	E	A	K	P	V	K	T	I	K	D	K	V	R	A	M	R	E	L	L	L	S	D	E
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	T	I	E	V	D	D	E	L	Y	S	Y	I	A	S	H	T	K	H	I	G	E	S	R	S	D	I	L	R	R	M	L	K	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	K	T	I	K	D	K	V	R	A	M	R	E	L	L	L	S	D	E
Template Known Secondary structure																		T			S	T	T												T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																									.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	E	Q	K	R	A	V	N	R	F	M	L	L	L	S	T	L	Y	S	L	D	A	Q	A	F	A	E	A	T	E	S	L	H	G	R	T	R	V	Y	F	A	A	D	E	Q	T	L	L	K	N	G	N	Q	T	K	P	K	H	V	P	G	T	P	Y	W	V	I	T	N	T	N	T	G	R	K	C	S	M	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	E	Q	K	R	A	V	N	R	F	M	L	L	L	S	T	L	Y	S	L	D	A	Q	A	F	A	E	A	T	E	S	L	H	G	R	T	R	V	Y	F	A	A	D	E	Q	T	L	L	K	N	G	N	Q	T	K	P	K	H	V	P	G	T	P	Y	W	V	I	T	N	T	N	T	G	R	K	C	S	M	I
Template Known Secondary structure							S																										T		B		S	S		B				S	S								S	S	S							T	T	S	S							S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	I	M	Q	S	M	Q	F	P	A	E	L	I	E	K	V	C	G	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	I	M	Q	S	M	Q	F	P	A	E	L	I	E	K	V	C	G	T	I
Template Known Secondary structure								T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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