 |
| Job Description | P0AFY8 | | Confidence | 5.09% | Date | Thu Jan 5 11:27:35 GMT 2012 |
| Rank | 79 | Aligned Residues | 64 |
| % Identity | 13% | Template | c1lnsA_ |
| PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:x-prolyl dipeptidyl aminopetidase; |
PDBTitle: crystal structure analysis of the x-prolyl dipeptidyl2 aminopeptidase from lactococcus lactis
|
| Resolution | 2.20 Å |
|
| | |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
|
|
|
|
|
|
|
|
|
| | | | | | |
|
|
|
| . | . | . |
|
|
|  |  |
|
|
|
|
| | | | | |
|
|
| |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
K | R | A | V | N | R | F | M | L | L | L | S | T | L | Y | S | L | D | A | Q | A | F | A | E | A | T | E | S | L | H | G | R | T | R | V | Y | F | A | A | D | E | Q | T | L | L | K | N | G | N | Q | . |
. |
. |
T | K | P | K | H | V | P | G | T | P | Y | W | V | I | T | N | T | N | T |
| Query Conservation | |
| | |
| |
|
|
| |
|
| | |
| | | | |
| | |
| | |
| | | |
| |
|
| |
| |
|
|
| |
| | | |
|
| | | | | | . | . | . | | |
|
| |
|
| |
| | |
|
| |
|
| |
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | . | | | . | . | . | . | | | | | | | | | | | | |
| | | | | | | | | | | |
| |
| |
| |
|
|
| | |
|
|
| Template Sequence | |
T | E | N | I | I | S | A | F | Y | Y | L | L | C | T | R | R | K | T | G | M | I | L | V | E | H | W | V | S | . |
E | G | . |
. |
. |
. |
L | L | P | L | D | N | H | Y | H | F | F | N | D | K | S | L | A | T | F | D | S | S | L | L | E | R | E | V | L | W | V | E | S | P | V | D | S |
| Template Known Secondary structure | |
| | | | | | | | | | | | | S | B |
| T | T | S | S | B | | | | | | | | . | T | T | . | . | . | . | S | S |
|
|
| S | S |
|
| | | T | T | | |
| S |
| S |
| G | G | G |
| | | | | | | | |
| S |
|
| T |
| Template Predicted Secondary structure | |
| | | | | | | | | | | | | |
|
|
|
| | | | | | | | | | | . |
|
| . | . | . | . |
|
|
|
|
|
|
|
| | | |
|
|
|
|
|
|
|
|
|
|
|
|
| | | | | | | | |
|
|
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
. | . | |
|
|
|
. | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
